Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SIX1Q15475 AC243654.2-201ENST00000612843 443 ntBASIC3.73□□□□□ -1.81
SIX1Q15475 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SIX1Q15475 AC008121.2-201ENST00000614647 523 ntBASIC3.73□□□□□ -1.81
SIX1Q15475 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SIX1Q15475 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SIX1Q15475 AL354798.1-201ENST00000622505 329 ntBASIC3.73□□□□□ -1.81
SIX1Q15475 AL078595.3-201ENST00000623815 1166 ntBASIC3.73□□□□□ -1.81
SIX1Q15475 AC034229.5-201ENST00000624258 185 ntBASIC3.73□□□□□ -1.81
SIX1Q15475 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SIX1Q15475 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SIX1Q15475 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SIX1Q15475 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.73□□□□□ -1.81
SIX1Q15475 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SIX1Q15475 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.73□□□□□ -1.81
SIX1Q15475 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SIX1Q15475 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
SIX1Q15475 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.73□□□□□ -1.81
SIX1Q15475 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SIX1Q15475 AC007390.2-201ENST00000606229 3803 ntBASIC3.72□□□□□ -1.81
SIX1Q15475 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SIX1Q15475 TNPO1P3-201ENST00000436471 2662 ntBASIC3.72□□□□□ -1.81
SIX1Q15475 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.72□□□□□ -1.81
SIX1Q15475 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
SIX1Q15475 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.72□□□□□ -1.81
SIX1Q15475 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.72□□□□□ -1.81
SIX1Q15475 SNORA11C-201ENST00000408532 129 ntBASIC3.72□□□□□ -1.81
SIX1Q15475 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.72□□□□□ -1.81
SIX1Q15475 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.72□□□□□ -1.81
SIX1Q15475 RPS7P9-201ENST00000414704 586 ntBASIC3.72□□□□□ -1.81
SIX1Q15475 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.72□□□□□ -1.81
SIX1Q15475 AC073069.1-201ENST00000428657 441 ntBASIC3.72□□□□□ -1.81
SIX1Q15475 ELOCP10-201ENST00000440624 327 ntBASIC3.72□□□□□ -1.81
SIX1Q15475 TPTE2P6-202ENST00000445572 1007 ntBASIC3.72□□□□□ -1.81
SIX1Q15475 ANP32BP2-201ENST00000454525 545 ntBASIC3.72□□□□□ -1.81
SIX1Q15475 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.72□□□□□ -1.81
SIX1Q15475 AC010285.3-201ENST00000511668 676 ntBASIC3.72□□□□□ -1.81
SIX1Q15475 AC010306.1-201ENST00000523223 1117 ntBASIC3.72□□□□□ -1.81
SIX1Q15475 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.72□□□□□ -1.81
SIX1Q15475 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.72□□□□□ -1.81
SIX1Q15475 AC124293.1-201ENST00000530034 493 ntBASIC3.72□□□□□ -1.81
SIX1Q15475 AC011602.1-201ENST00000546484 331 ntBASIC3.72□□□□□ -1.81
SIX1Q15475 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SIX1Q15475 MTCYBP23-201ENST00000558717 1102 ntBASIC3.72□□□□□ -1.81
SIX1Q15475 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.72□□□□□ -1.81
SIX1Q15475 MTCO1P40-201ENST00000574371 625 ntBASIC3.72□□□□□ -1.81
SIX1Q15475 VN1R84P-201ENST00000593697 235 ntBASIC3.72□□□□□ -1.81
SIX1Q15475 AC005255.1-201ENST00000593748 216 ntBASIC3.72□□□□□ -1.81
SIX1Q15475 AC244505.7-201ENST00000599675 272 ntBASIC3.72□□□□□ -1.81
SIX1Q15475 ELOCP34-201ENST00000604436 327 ntBASIC3.72□□□□□ -1.81
SIX1Q15475 AC010200.2-201ENST00000605098 235 ntBASIC3.72□□□□□ -1.81
SIX1Q15475 AL157392.4-201ENST00000609756 345 ntBASIC3.72□□□□□ -1.81
SIX1Q15475 AL592295.2-201ENST00000612578 206 ntBASIC3.72□□□□□ -1.81
SIX1Q15475 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.72□□□□□ -1.81
SIX1Q15475 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.72□□□□□ -1.81
SIX1Q15475 AC068787.1-201ENST00000623908 691 ntBASIC3.72□□□□□ -1.81
SIX1Q15475 AC008993.2-201ENST00000631744 806 ntBASIC3.72□□□□□ -1.81
SIX1Q15475 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SIX1Q15475 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.72□□□□□ -1.81
SIX1Q15475 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.72□□□□□ -1.81
SIX1Q15475 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
SIX1Q15475 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SIX1Q15475 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
SIX1Q15475 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
SIX1Q15475 MFSD8-236ENST00000641509 4050 ntBASIC3.71□□□□□ -1.81
SIX1Q15475 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.81
SIX1Q15475 ZNF29P-201ENST00000225587 168 ntBASIC3.71□□□□□ -1.82
SIX1Q15475 ANKRD36P1-201ENST00000344424 659 ntBASIC3.71□□□□□ -1.82
SIX1Q15475 RNU1-85P-201ENST00000364127 164 ntBASIC3.71□□□□□ -1.82
SIX1Q15475 RN7SKP280-201ENST00000364196 304 ntBASIC3.71□□□□□ -1.82
SIX1Q15475 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.71□□□□□ -1.82
SIX1Q15475 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SIX1Q15475 MIR92A2-201ENST00000385299 75 ntBASIC3.71□□□□□ -1.82
SIX1Q15475 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.71□□□□□ -1.82
SIX1Q15475 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SIX1Q15475 RNU2-6P-201ENST00000411404 190 ntBASIC3.71□□□□□ -1.82
SIX1Q15475 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.71□□□□□ -1.82
SIX1Q15475 MTND4P3-201ENST00000417829 541 ntBASIC3.71□□□□□ -1.82
SIX1Q15475 AL449283.1-202ENST00000418249 604 ntBASIC3.71□□□□□ -1.82
SIX1Q15475 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.71□□□□□ -1.82
SIX1Q15475 AC099336.2-201ENST00000422457 254 ntBASIC3.71□□□□□ -1.82
SIX1Q15475 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.71□□□□□ -1.82
SIX1Q15475 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
SIX1Q15475 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.71□□□□□ -1.82
SIX1Q15475 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.71□□□□□ -1.82
SIX1Q15475 GTF2IP3-201ENST00000433887 494 ntBASIC3.71□□□□□ -1.82
SIX1Q15475 HMGB1P45-201ENST00000435986 653 ntBASIC3.71□□□□□ -1.82
SIX1Q15475 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.71□□□□□ -1.82
SIX1Q15475 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.71□□□□□ -1.82
SIX1Q15475 RPS4XP2-201ENST00000458402 793 ntBASIC3.71□□□□□ -1.82
SIX1Q15475 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.71□□□□□ -1.82
SIX1Q15475 RPS20P21-201ENST00000466859 343 ntBASIC3.71□□□□□ -1.82
SIX1Q15475 AC091860.1-201ENST00000505723 432 ntBASIC3.71□□□□□ -1.82
SIX1Q15475 AC010460.1-201ENST00000507087 466 ntBASIC3.71□□□□□ -1.82
SIX1Q15475 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
SIX1Q15475 AC113420.1-201ENST00000507903 571 ntBASIC3.71□□□□□ -1.82
SIX1Q15475 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.71□□□□□ -1.82
SIX1Q15475 MIR2276-201ENST00000516886 89 ntBASIC3.71□□□□□ -1.82
SIX1Q15475 RN7SKP60-201ENST00000516985 239 ntBASIC3.71□□□□□ -1.82
SIX1Q15475 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms