Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CLDN20P56880 AL109653.1-201ENST00000603091 248 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 AC112220.3-201ENST00000605502 502 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 HSPE1P14-201ENST00000605812 302 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 AP001521.1-201ENST00000609150 300 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 AC245297.2-201ENST00000610119 565 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 AC005962.2-201ENST00000611427 652 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 AC233309.1-201ENST00000619522 751 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 MIR6758-201ENST00000620653 63 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.99□□□□□ -1.77
CLDN20P56880 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.99□□□□□ -1.77
CLDN20P56880 MIR3974-201ENST00000637126 96 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CLDN20P56880 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.99□□□□□ -1.77
CLDN20P56880 ZNF37BP-203ENST00000452306 1352 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 MTND4P34-201ENST00000572715 1371 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLDN20P56880 ERCC6-202ENST00000374127 1782 ntBASIC3.99□□□□□ -1.77
CLDN20P56880 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLDN20P56880 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.99□□□□□ -1.77
CLDN20P56880 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLDN20P56880 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.98□□□□□ -1.77
CLDN20P56880 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLDN20P56880 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLDN20P56880 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CLDN20P56880 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CLDN20P56880 AC018555.1-201ENST00000567548 1980 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLDN20P56880 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLDN20P56880 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.98□□□□□ -1.77
CLDN20P56880 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLDN20P56880 RPL32P3-201ENST00000359025 275 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 RNU4-40P-201ENST00000364351 143 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 RNA5SP509-201ENST00000364577 119 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.98□□□□□ -1.77
CLDN20P56880 ZNF603P-201ENST00000405613 487 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 RPL23AP48-201ENST00000406913 488 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 RNU2-28P-201ENST00000410457 189 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 RNU4-25P-201ENST00000410569 230 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 RPS20P14-201ENST00000412545 360 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 JKAMPP1-201ENST00000413804 919 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 P2RY10P2-201ENST00000416730 913 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 NUP35P2-201ENST00000416748 943 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 AL022400.1-201ENST00000423946 935 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 AC096632.1-201ENST00000427395 310 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.98□□□□□ -1.77
CLDN20P56880 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.98□□□□□ -1.77
CLDN20P56880 MTND2P19-201ENST00000449129 1012 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.98□□□□□ -1.77
CLDN20P56880 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.98□□□□□ -1.77
CLDN20P56880 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLDN20P56880 HMGB3P21-201ENST00000452483 547 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLDN20P56880 DHFRP3-201ENST00000455595 559 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 MTCO3P2-201ENST00000457365 171 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 AC010301.1-201ENST00000473936 355 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 RN7SL810P-201ENST00000493031 276 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 AC147055.4-201ENST00000504399 745 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 RPF2P2-201ENST00000504693 896 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 AC090071.1-201ENST00000507713 644 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLDN20P56880 AC093840.1-201ENST00000511599 336 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 RN7SKP82-201ENST00000516786 223 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 AC022790.1-201ENST00000522872 204 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.98□□□□□ -1.77
CLDN20P56880 OR4A12P-201ENST00000530847 918 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.98□□□□□ -1.77
CLDN20P56880 AC090502.2-201ENST00000549267 280 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.98□□□□□ -1.77
CLDN20P56880 AC090888.1-201ENST00000561335 1141 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.98□□□□□ -1.77
CLDN20P56880 ISCA1P3-201ENST00000577104 373 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 MIR4504-201ENST00000577413 92 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.98□□□□□ -1.77
CLDN20P56880 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.98□□□□□ -1.77
CLDN20P56880 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.98□□□□□ -1.77
CLDN20P56880 AC006539.2-201ENST00000601729 572 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLDN20P56880 AL160290.3-201ENST00000604869 165 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 AC006270.3-201ENST00000605967 1036 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 AP002360.3-201ENST00000607673 710 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 AL136981.2-201ENST00000617319 734 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 AC103858.2-201ENST00000621471 543 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 AC079248.2-201ENST00000623779 326 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 AC011944.2-201ENST00000624440 683 ntBASIC3.98□□□□□ -1.77
CLDN20P56880 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.98□□□□□ -1.77
CLDN20P56880 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLDN20P56880 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLDN20P56880 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLDN20P56880 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.98□□□□□ -1.77
CLDN20P56880 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.98□□□□□ -1.77
CLDN20P56880 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.98□□□□□ -1.77
CLDN20P56880 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.98□□□□□ -1.77
CLDN20P56880 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLDN20P56880 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN20P56880 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN20P56880 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN20P56880 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
CLDN20P56880 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms