Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.46□□□□□ -1.7
HDAC4P56524 RPS20P21-201ENST00000466859 343 ntBASIC4.46□□□□□ -1.7
HDAC4P56524 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.46□□□□□ -1.7
HDAC4P56524 AC011352.3-201ENST00000505162 593 ntBASIC4.46□□□□□ -1.7
HDAC4P56524 FABP5P12-201ENST00000515543 389 ntBASIC4.46□□□□□ -1.7
HDAC4P56524 RNU6-488P-201ENST00000515918 99 ntBASIC4.46□□□□□ -1.7
HDAC4P56524 RN7SKP122-201ENST00000515923 296 ntBASIC4.46□□□□□ -1.7
HDAC4P56524 RNU6-885P-201ENST00000516607 104 ntBASIC4.46□□□□□ -1.7
HDAC4P56524 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.46□□□□□ -1.7
HDAC4P56524 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.46□□□□□ -1.7
HDAC4P56524 PDCL2P2-201ENST00000533651 189 ntBASIC4.46□□□□□ -1.7
HDAC4P56524 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.46□□□□□ -1.7
HDAC4P56524 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.46□□□□□ -1.7
HDAC4P56524 CBX3P5-201ENST00000552017 521 ntBASIC4.46□□□□□ -1.7
HDAC4P56524 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.46□□□□□ -1.7
HDAC4P56524 AC124068.1-201ENST00000563131 678 ntBASIC4.46□□□□□ -1.7
HDAC4P56524 BNIP3P24-201ENST00000593398 557 ntBASIC4.46□□□□□ -1.7
HDAC4P56524 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.46□□□□□ -1.7
HDAC4P56524 AL590392.1-201ENST00000604960 446 ntBASIC4.46□□□□□ -1.7
HDAC4P56524 TUSC7.1-201ENST00000610969 165 ntBASIC4.46□□□□□ -1.7
HDAC4P56524 AL359535.1-201ENST00000612100 1087 ntBASIC4.46□□□□□ -1.7
HDAC4P56524 AL392048.1-201ENST00000613946 534 ntBASIC4.46□□□□□ -1.7
HDAC4P56524 AC099669.2-201ENST00000616549 437 ntBASIC4.46□□□□□ -1.7
HDAC4P56524 AC091304.6-201ENST00000619761 202 ntBASIC4.46□□□□□ -1.7
HDAC4P56524 AC079416.3-201ENST00000624479 549 ntBASIC4.46□□□□□ -1.7
HDAC4P56524 AC009039.2-201ENST00000624524 529 ntBASIC4.46□□□□□ -1.7
HDAC4P56524 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.46□□□□□ -1.7
HDAC4P56524 MIR1322-201ENST00000638013 71 ntBASIC4.46□□□□□ -1.7
HDAC4P56524 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.7
HDAC4P56524 AC106871.1-201ENST00000568324 3102 ntBASIC4.46□□□□□ -1.7
HDAC4P56524 MARK2P15-201ENST00000432204 2186 ntBASIC4.46□□□□□ -1.7
HDAC4P56524 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HDAC4P56524 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.45□□□□□ -1.7
HDAC4P56524 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HDAC4P56524 AC025125.1-201ENST00000624743 1922 ntBASIC4.45□□□□□ -1.7
HDAC4P56524 AC007685.1-201ENST00000329806 452 ntBASIC4.45□□□□□ -1.7
HDAC4P56524 RNU6-582P-201ENST00000362989 107 ntBASIC4.45□□□□□ -1.7
HDAC4P56524 RNU1-132P-201ENST00000364300 164 ntBASIC4.45□□□□□ -1.7
HDAC4P56524 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.45□□□□□ -1.7
HDAC4P56524 Y_RNA.465-201ENST00000384293 102 ntBASIC4.45□□□□□ -1.7
HDAC4P56524 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.45□□□□□ -1.7
HDAC4P56524 RN7SKP235-201ENST00000410662 305 ntBASIC4.45□□□□□ -1.7
HDAC4P56524 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.45□□□□□ -1.7
HDAC4P56524 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.45□□□□□ -1.7
HDAC4P56524 MRPS36P1-201ENST00000421291 307 ntBASIC4.45□□□□□ -1.7
HDAC4P56524 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.45□□□□□ -1.7
HDAC4P56524 USP9YP31-201ENST00000431405 881 ntBASIC4.45□□□□□ -1.7
HDAC4P56524 MTND1P32-201ENST00000433043 938 ntBASIC4.45□□□□□ -1.7
HDAC4P56524 SEPT7P5-201ENST00000434048 306 ntBASIC4.45□□□□□ -1.7
HDAC4P56524 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.45□□□□□ -1.7
HDAC4P56524 AL034418.1-201ENST00000448675 860 ntBASIC4.45□□□□□ -1.7
HDAC4P56524 RPL23AP81-201ENST00000455252 467 ntBASIC4.45□□□□□ -1.7
HDAC4P56524 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HDAC4P56524 AC108734.3-201ENST00000481241 1165 ntBASIC4.45□□□□□ -1.7
HDAC4P56524 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.45□□□□□ -1.7
HDAC4P56524 RN7SL604P-201ENST00000492589 296 ntBASIC4.45□□□□□ -1.7
HDAC4P56524 RN7SKP21-201ENST00000516503 220 ntBASIC4.45□□□□□ -1.7
HDAC4P56524 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.45□□□□□ -1.7
HDAC4P56524 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.45□□□□□ -1.7
HDAC4P56524 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.45□□□□□ -1.7
HDAC4P56524 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.45□□□□□ -1.7
HDAC4P56524 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.45□□□□□ -1.7
HDAC4P56524 AGGF1P6-201ENST00000569213 976 ntBASIC4.45□□□□□ -1.7
HDAC4P56524 AL354943.1-201ENST00000572103 781 ntBASIC4.45□□□□□ -1.7
HDAC4P56524 MIR4277-201ENST00000578298 84 ntBASIC4.45□□□□□ -1.7
HDAC4P56524 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.45□□□□□ -1.7
HDAC4P56524 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.45□□□□□ -1.7
HDAC4P56524 AC022069.1-201ENST00000582910 658 ntBASIC4.45□□□□□ -1.7
HDAC4P56524 AC113194.1-201ENST00000606037 500 ntBASIC4.45□□□□□ -1.7
HDAC4P56524 AL354760.1-201ENST00000608357 643 ntBASIC4.45□□□□□ -1.7
HDAC4P56524 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.45□□□□□ -1.7
HDAC4P56524 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.45□□□□□ -1.7
HDAC4P56524 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
HDAC4P56524 MIR4727-201ENST00000622232 55 ntBASIC4.45□□□□□ -1.7
HDAC4P56524 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.45□□□□□ -1.7
HDAC4P56524 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
HDAC4P56524 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HDAC4P56524 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HDAC4P56524 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HDAC4P56524 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
HDAC4P56524 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HDAC4P56524 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
HDAC4P56524 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HDAC4P56524 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.44□□□□□ -1.7
HDAC4P56524 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HDAC4P56524 XIAPP3-201ENST00000312918 795 ntBASIC4.44□□□□□ -1.7
HDAC4P56524 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
HDAC4P56524 FAM133CP-201ENST00000332869 704 ntBASIC4.44□□□□□ -1.7
HDAC4P56524 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
HDAC4P56524 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HDAC4P56524 OR5H2-201ENST00000355273 945 ntBASIC4.44□□□□□ -1.7
HDAC4P56524 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
HDAC4P56524 RNU1-14P-201ENST00000362759 152 ntBASIC4.44□□□□□ -1.7
HDAC4P56524 RNU6-560P-201ENST00000364007 108 ntBASIC4.44□□□□□ -1.7
HDAC4P56524 RNA5SP479-201ENST00000364858 117 ntBASIC4.44□□□□□ -1.7
HDAC4P56524 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.44□□□□□ -1.7
HDAC4P56524 SNORD116-23-201ENST00000384645 92 ntBASIC4.44□□□□□ -1.7
HDAC4P56524 RNA5SP36-201ENST00000410197 133 ntBASIC4.44□□□□□ -1.7
HDAC4P56524 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.44□□□□□ -1.7
HDAC4P56524 RPS23P10-201ENST00000416185 486 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms