Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC244258.1-201ENST00000637553 1071 ntBASIC3.66□□□□□ -1.82
CDH4P55283 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDH4P55283 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDH4P55283 AC006504.1-201ENST00000562493 3666 ntBASIC3.65□□□□□ -1.82
CDH4P55283 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.65□□□□□ -1.82
CDH4P55283 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CDH4P55283 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CDH4P55283 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDH4P55283 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDH4P55283 AL512646.1-201ENST00000269395 1077 ntBASIC3.65□□□□□ -1.83
CDH4P55283 ENSAP3-201ENST00000312710 333 ntBASIC3.65□□□□□ -1.83
CDH4P55283 RNA5SP42-201ENST00000364278 115 ntBASIC3.65□□□□□ -1.83
CDH4P55283 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.65□□□□□ -1.83
CDH4P55283 AL355379.1-201ENST00000405542 640 ntBASIC3.65□□□□□ -1.83
CDH4P55283 HMGB3P31-201ENST00000413333 595 ntBASIC3.65□□□□□ -1.83
CDH4P55283 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.65□□□□□ -1.83
CDH4P55283 AC073063.1-201ENST00000434352 607 ntBASIC3.65□□□□□ -1.83
CDH4P55283 AL138799.3-201ENST00000438968 350 ntBASIC3.65□□□□□ -1.83
CDH4P55283 AC233982.1-201ENST00000451247 436 ntBASIC3.65□□□□□ -1.83
CDH4P55283 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.65□□□□□ -1.83
CDH4P55283 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH4P55283 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH4P55283 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH4P55283 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH4P55283 RNU2-58P-201ENST00000516403 183 ntBASIC3.65□□□□□ -1.83
CDH4P55283 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH4P55283 AC104115.2-201ENST00000523026 687 ntBASIC3.65□□□□□ -1.83
CDH4P55283 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CDH4P55283 OR5B10P-201ENST00000532869 642 ntBASIC3.65□□□□□ -1.83
CDH4P55283 AP003717.3-201ENST00000544832 1180 ntBASIC3.65□□□□□ -1.83
CDH4P55283 MIR5047-201ENST00000579212 100 ntBASIC3.65□□□□□ -1.83
CDH4P55283 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
CDH4P55283 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH4P55283 AC092354.2-201ENST00000607786 514 ntBASIC3.65□□□□□ -1.83
CDH4P55283 AP001033.2-201ENST00000609701 1003 ntBASIC3.65□□□□□ -1.83
CDH4P55283 AC018926.3-201ENST00000618841 406 ntBASIC3.65□□□□□ -1.83
CDH4P55283 AC017104.5-201ENST00000637647 639 ntBASIC3.65□□□□□ -1.83
CDH4P55283 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CDH4P55283 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDH4P55283 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH4P55283 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDH4P55283 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CDH4P55283 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CDH4P55283 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CDH4P55283 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDH4P55283 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.64□□□□□ -1.83
CDH4P55283 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.64□□□□□ -1.83
CDH4P55283 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDH4P55283 RNA5SP119-201ENST00000362715 117 ntBASIC3.64□□□□□ -1.83
CDH4P55283 RNA5SP27-201ENST00000363839 119 ntBASIC3.64□□□□□ -1.83
CDH4P55283 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDH4P55283 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDH4P55283 PTMAP5-201ENST00000393073 333 ntBASIC3.64□□□□□ -1.83
CDH4P55283 DBIP2-201ENST00000419076 262 ntBASIC3.64□□□□□ -1.83
CDH4P55283 AL389915.1-201ENST00000422463 466 ntBASIC3.64□□□□□ -1.83
CDH4P55283 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH4P55283 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH4P55283 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.64□□□□□ -1.83
CDH4P55283 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDH4P55283 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH4P55283 YWHAZP8-201ENST00000436935 731 ntBASIC3.64□□□□□ -1.83
CDH4P55283 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH4P55283 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH4P55283 AC078785.3-201ENST00000476607 425 ntBASIC3.64□□□□□ -1.83
CDH4P55283 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.64□□□□□ -1.83
CDH4P55283 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH4P55283 RNU2-27P-201ENST00000516185 142 ntBASIC3.64□□□□□ -1.83
CDH4P55283 RNU6-362P-201ENST00000516736 90 ntBASIC3.64□□□□□ -1.83
CDH4P55283 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.64□□□□□ -1.83
CDH4P55283 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH4P55283 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.64□□□□□ -1.83
CDH4P55283 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.64□□□□□ -1.83
CDH4P55283 MIR3922-201ENST00000585192 84 ntBASIC3.64□□□□□ -1.83
CDH4P55283 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH4P55283 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH4P55283 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.64□□□□□ -1.83
CDH4P55283 OR6C71P-202ENST00000641886 1107 ntBASIC3.64□□□□□ -1.83
CDH4P55283 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDH4P55283 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
CDH4P55283 AL021368.2-201ENST00000606125 5352 ntBASIC3.64□□□□□ -1.83
CDH4P55283 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDH4P55283 MTND4P8-201ENST00000514997 1362 ntBASIC3.63□□□□□ -1.83
CDH4P55283 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
CDH4P55283 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDH4P55283 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDH4P55283 MFSD8-233ENST00000641482 4860 ntBASIC3.63□□□□□ -1.83
CDH4P55283 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CDH4P55283 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.63□□□□□ -1.83
CDH4P55283 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDH4P55283 AC046144.1-201ENST00000478559 1853 ntBASIC3.63□□□□□ -1.83
CDH4P55283 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDH4P55283 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDH4P55283 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CDH4P55283 SNORA51.12-201ENST00000384448 134 ntBASIC3.63□□□□□ -1.83
CDH4P55283 ATF1P1-201ENST00000406040 927 ntBASIC3.63□□□□□ -1.83
CDH4P55283 RN7SKP53-201ENST00000411337 315 ntBASIC3.63□□□□□ -1.83
CDH4P55283 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH4P55283 FAR1P1-201ENST00000427163 934 ntBASIC3.63□□□□□ -1.83
CDH4P55283 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CDH4P55283 AL590399.6-201ENST00000446396 307 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms