Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CACNA2D1P54289 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CACNA2D1P54289 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.81□□□□□ -1.64
CACNA2D1P54289 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CACNA2D1P54289 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CACNA2D1P54289 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
CACNA2D1P54289 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CACNA2D1P54289 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CACNA2D1P54289 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CACNA2D1P54289 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CACNA2D1P54289 MAPK10-286ENST00000641208 8747 ntBASIC4.8□□□□□ -1.64
CACNA2D1P54289 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.8□□□□□ -1.64
CACNA2D1P54289 OR10J6P-201ENST00000289731 930 ntBASIC4.8□□□□□ -1.64
CACNA2D1P54289 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CACNA2D1P54289 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CACNA2D1P54289 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CACNA2D1P54289 RNU6-660P-201ENST00000364566 109 ntBASIC4.8□□□□□ -1.64
CACNA2D1P54289 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.8□□□□□ -1.64
CACNA2D1P54289 Y_RNA.390-201ENST00000383932 102 ntBASIC4.8□□□□□ -1.64
CACNA2D1P54289 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CACNA2D1P54289 RPS3AP24-201ENST00000407896 734 ntBASIC4.8□□□□□ -1.64
CACNA2D1P54289 AC092745.2-202ENST00000411880 369 ntBASIC4.8□□□□□ -1.64
CACNA2D1P54289 AL160275.2-201ENST00000412010 394 ntBASIC4.8□□□□□ -1.64
CACNA2D1P54289 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.8□□□□□ -1.64
CACNA2D1P54289 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.8□□□□□ -1.64
CACNA2D1P54289 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.8□□□□□ -1.64
CACNA2D1P54289 MTND1P2-201ENST00000430604 821 ntBASIC4.8□□□□□ -1.64
CACNA2D1P54289 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.8□□□□□ -1.64
CACNA2D1P54289 RPS25P9-201ENST00000435591 252 ntBASIC4.8□□□□□ -1.64
CACNA2D1P54289 LARP1BP3-201ENST00000437229 869 ntBASIC4.8□□□□□ -1.64
CACNA2D1P54289 AC091862.1-201ENST00000438016 1100 ntBASIC4.8□□□□□ -1.64
CACNA2D1P54289 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.8□□□□□ -1.64
CACNA2D1P54289 COX6CP12-201ENST00000446748 202 ntBASIC4.8□□□□□ -1.64
CACNA2D1P54289 AC073522.1-201ENST00000483312 377 ntBASIC4.8□□□□□ -1.64
CACNA2D1P54289 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.8□□□□□ -1.64
CACNA2D1P54289 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.8□□□□□ -1.64
CACNA2D1P54289 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.8□□□□□ -1.64
CACNA2D1P54289 RNU6-718P-201ENST00000516166 105 ntBASIC4.8□□□□□ -1.64
CACNA2D1P54289 RNU6-416P-201ENST00000516265 103 ntBASIC4.8□□□□□ -1.64
CACNA2D1P54289 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.8□□□□□ -1.64
CACNA2D1P54289 MED28P5-201ENST00000528254 438 ntBASIC4.8□□□□□ -1.64
CACNA2D1P54289 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.8□□□□□ -1.64
CACNA2D1P54289 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.8□□□□□ -1.64
CACNA2D1P54289 EEF1B2P4-201ENST00000551398 348 ntBASIC4.8□□□□□ -1.64
CACNA2D1P54289 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.8□□□□□ -1.64
CACNA2D1P54289 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.8□□□□□ -1.64
CACNA2D1P54289 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.8□□□□□ -1.64
CACNA2D1P54289 AC020634.1-201ENST00000608701 549 ntBASIC4.8□□□□□ -1.64
CACNA2D1P54289 AC012360.2-201ENST00000609349 391 ntBASIC4.8□□□□□ -1.64
CACNA2D1P54289 AC012409.3-201ENST00000611343 981 ntBASIC4.8□□□□□ -1.64
CACNA2D1P54289 AL158196.1-201ENST00000616786 434 ntBASIC4.8□□□□□ -1.64
CACNA2D1P54289 AL357080.1-201ENST00000617394 239 ntBASIC4.8□□□□□ -1.64
CACNA2D1P54289 AC055839.1-201ENST00000634467 498 ntBASIC4.8□□□□□ -1.64
CACNA2D1P54289 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CACNA2D1P54289 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CACNA2D1P54289 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CACNA2D1P54289 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
CACNA2D1P54289 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CACNA2D1P54289 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CACNA2D1P54289 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.79□□□□□ -1.64
CACNA2D1P54289 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CACNA2D1P54289 OR4G2P-201ENST00000328113 903 ntBASIC4.79□□□□□ -1.64
CACNA2D1P54289 RNU1-130P-201ENST00000363930 160 ntBASIC4.79□□□□□ -1.64
CACNA2D1P54289 Y_RNA.303-201ENST00000364998 94 ntBASIC4.79□□□□□ -1.64
CACNA2D1P54289 RNU6-1042P-201ENST00000384204 107 ntBASIC4.79□□□□□ -1.64
CACNA2D1P54289 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CACNA2D1P54289 BTF3P7-201ENST00000407097 488 ntBASIC4.79□□□□□ -1.64
CACNA2D1P54289 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.79□□□□□ -1.64
CACNA2D1P54289 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.79□□□□□ -1.64
CACNA2D1P54289 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.79□□□□□ -1.64
CACNA2D1P54289 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.79□□□□□ -1.64
CACNA2D1P54289 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.79□□□□□ -1.64
CACNA2D1P54289 AC122718.1-201ENST00000439448 744 ntBASIC4.79□□□□□ -1.64
CACNA2D1P54289 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.79□□□□□ -1.64
CACNA2D1P54289 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.79□□□□□ -1.64
CACNA2D1P54289 COX6CP18-201ENST00000448769 222 ntBASIC4.79□□□□□ -1.64
CACNA2D1P54289 AL162591.2-201ENST00000449634 317 ntBASIC4.79□□□□□ -1.64
CACNA2D1P54289 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.79□□□□□ -1.64
CACNA2D1P54289 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CACNA2D1P54289 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.79□□□□□ -1.64
CACNA2D1P54289 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.79□□□□□ -1.64
CACNA2D1P54289 RNA5SP269-201ENST00000459032 137 ntBASIC4.79□□□□□ -1.64
CACNA2D1P54289 FAM133DP-201ENST00000464802 691 ntBASIC4.79□□□□□ -1.64
CACNA2D1P54289 RN7SL481P-201ENST00000477764 299 ntBASIC4.79□□□□□ -1.64
CACNA2D1P54289 NIP7P2-201ENST00000485801 544 ntBASIC4.79□□□□□ -1.64
CACNA2D1P54289 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.79□□□□□ -1.64
CACNA2D1P54289 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.79□□□□□ -1.64
CACNA2D1P54289 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
CACNA2D1P54289 AC093281.2-201ENST00000510153 597 ntBASIC4.79□□□□□ -1.64
CACNA2D1P54289 RNU6-1225P-201ENST00000516336 65 ntBASIC4.79□□□□□ -1.64
CACNA2D1P54289 snoU109.6-201ENST00000516831 118 ntBASIC4.79□□□□□ -1.64
CACNA2D1P54289 OR4R3P-201ENST00000525084 838 ntBASIC4.79□□□□□ -1.64
CACNA2D1P54289 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.79□□□□□ -1.64
CACNA2D1P54289 OR7K1P-201ENST00000546439 926 ntBASIC4.79□□□□□ -1.64
CACNA2D1P54289 GTF2IP22-201ENST00000554443 182 ntBASIC4.79□□□□□ -1.64
CACNA2D1P54289 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.79□□□□□ -1.64
CACNA2D1P54289 MIR4277-201ENST00000578298 84 ntBASIC4.79□□□□□ -1.64
CACNA2D1P54289 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CACNA2D1P54289 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.79□□□□□ -1.64
CACNA2D1P54289 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms