Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PTPN9P43378 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PTPN9P43378 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.42□□□□□ -1.7
PTPN9P43378 AC068533.2-201ENST00000411872 306 ntBASIC4.42□□□□□ -1.7
PTPN9P43378 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.42□□□□□ -1.7
PTPN9P43378 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.42□□□□□ -1.7
PTPN9P43378 AC090960.1-201ENST00000421072 306 ntBASIC4.42□□□□□ -1.7
PTPN9P43378 EIF4EP1-201ENST00000422311 642 ntBASIC4.42□□□□□ -1.7
PTPN9P43378 RPL18P10-201ENST00000425606 538 ntBASIC4.42□□□□□ -1.7
PTPN9P43378 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.42□□□□□ -1.7
PTPN9P43378 HLA-N-201ENST00000437516 135 ntBASIC4.42□□□□□ -1.7
PTPN9P43378 MTND2P20-201ENST00000440805 661 ntBASIC4.42□□□□□ -1.7
PTPN9P43378 AC041039.1-201ENST00000485656 536 ntBASIC4.42□□□□□ -1.7
PTPN9P43378 RPL7P38-201ENST00000488396 739 ntBASIC4.42□□□□□ -1.7
PTPN9P43378 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
PTPN9P43378 RPF2P2-201ENST00000504693 896 ntBASIC4.42□□□□□ -1.7
PTPN9P43378 AC021146.8-201ENST00000507455 733 ntBASIC4.42□□□□□ -1.7
PTPN9P43378 AC093840.1-201ENST00000511599 336 ntBASIC4.42□□□□□ -1.7
PTPN9P43378 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PTPN9P43378 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
PTPN9P43378 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.42□□□□□ -1.7
PTPN9P43378 RNA5SP519-201ENST00000516480 119 ntBASIC4.42□□□□□ -1.7
PTPN9P43378 AC090281.1-201ENST00000523019 276 ntBASIC4.42□□□□□ -1.7
PTPN9P43378 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
PTPN9P43378 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.42□□□□□ -1.7
PTPN9P43378 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.42□□□□□ -1.7
PTPN9P43378 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.42□□□□□ -1.7
PTPN9P43378 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.42□□□□□ -1.7
PTPN9P43378 AC084757.1-201ENST00000559987 490 ntBASIC4.42□□□□□ -1.7
PTPN9P43378 EIF5A2P1-201ENST00000564027 460 ntBASIC4.42□□□□□ -1.7
PTPN9P43378 AL356489.2-201ENST00000566968 3528 ntBASIC4.42□□□□□ -1.7
PTPN9P43378 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.42□□□□□ -1.7
PTPN9P43378 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.42□□□□□ -1.7
PTPN9P43378 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.42□□□□□ -1.7
PTPN9P43378 AC114878.2-201ENST00000604863 1251 ntBASIC4.42□□□□□ -1.7
PTPN9P43378 AC069304.2-201ENST00000605154 435 ntBASIC4.42□□□□□ -1.7
PTPN9P43378 MIR6748-201ENST00000610433 71 ntBASIC4.42□□□□□ -1.7
PTPN9P43378 AL359535.1-201ENST00000612100 1087 ntBASIC4.42□□□□□ -1.7
PTPN9P43378 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PTPN9P43378 AC120349.2-201ENST00000625002 298 ntBASIC4.42□□□□□ -1.7
PTPN9P43378 AC011978.2-201ENST00000569835 2054 ntBASIC4.42□□□□□ -1.7
PTPN9P43378 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTPN9P43378 ZNF542P-204ENST00000482727 1305 ntBASIC4.42□□□□□ -1.7
PTPN9P43378 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.41□□□□□ -1.7
PTPN9P43378 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTPN9P43378 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.41□□□□□ -1.7
PTPN9P43378 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTPN9P43378 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTPN9P43378 DSTNP4-201ENST00000399472 474 ntBASIC4.41□□□□□ -1.7
PTPN9P43378 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.41□□□□□ -1.7
PTPN9P43378 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.41□□□□□ -1.7
PTPN9P43378 PTP4A1P5-201ENST00000420305 455 ntBASIC4.41□□□□□ -1.7
PTPN9P43378 AL390023.1-201ENST00000428836 262 ntBASIC4.41□□□□□ -1.7
PTPN9P43378 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.41□□□□□ -1.7
PTPN9P43378 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.41□□□□□ -1.7
PTPN9P43378 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
PTPN9P43378 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.41□□□□□ -1.7
PTPN9P43378 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.41□□□□□ -1.7
PTPN9P43378 MTND2P19-201ENST00000449129 1012 ntBASIC4.41□□□□□ -1.7
PTPN9P43378 RPL12P26-201ENST00000452430 487 ntBASIC4.41□□□□□ -1.7
PTPN9P43378 MTCO3P11-201ENST00000455103 774 ntBASIC4.41□□□□□ -1.7
PTPN9P43378 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.41□□□□□ -1.7
PTPN9P43378 AC010468.1-201ENST00000461022 817 ntBASIC4.41□□□□□ -1.7
PTPN9P43378 RPS29P19-201ENST00000479709 171 ntBASIC4.41□□□□□ -1.7
PTPN9P43378 BET1P1-201ENST00000482276 359 ntBASIC4.41□□□□□ -1.7
PTPN9P43378 RPS6P4-201ENST00000494693 758 ntBASIC4.41□□□□□ -1.7
PTPN9P43378 KCTD9P2-201ENST00000512203 1013 ntBASIC4.41□□□□□ -1.7
PTPN9P43378 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.41□□□□□ -1.7
PTPN9P43378 AP000790.1-201ENST00000528891 737 ntBASIC4.41□□□□□ -1.7
PTPN9P43378 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.41□□□□□ -1.7
PTPN9P43378 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.41□□□□□ -1.7
PTPN9P43378 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.41□□□□□ -1.7
PTPN9P43378 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.41□□□□□ -1.7
PTPN9P43378 AC090888.1-201ENST00000561335 1141 ntBASIC4.41□□□□□ -1.7
PTPN9P43378 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.41□□□□□ -1.7
PTPN9P43378 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.41□□□□□ -1.7
PTPN9P43378 AC090616.2-202ENST00000584248 222 ntBASIC4.41□□□□□ -1.7
PTPN9P43378 ELOCP28-201ENST00000590044 317 ntBASIC4.41□□□□□ -1.7
PTPN9P43378 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PTPN9P43378 AL109653.1-201ENST00000603091 248 ntBASIC4.41□□□□□ -1.7
PTPN9P43378 AC103881.1-201ENST00000603476 538 ntBASIC4.41□□□□□ -1.7
PTPN9P43378 AL161729.3-201ENST00000603533 673 ntBASIC4.41□□□□□ -1.7
PTPN9P43378 Z99497.2-201ENST00000603634 310 ntBASIC4.41□□□□□ -1.7
PTPN9P43378 AC005962.2-201ENST00000611427 652 ntBASIC4.41□□□□□ -1.7
PTPN9P43378 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.41□□□□□ -1.7
PTPN9P43378 MIR7702-201ENST00000621931 59 ntBASIC4.41□□□□□ -1.7
PTPN9P43378 AL356121.2-201ENST00000624715 780 ntBASIC4.41□□□□□ -1.7
PTPN9P43378 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.41□□□□□ -1.7
PTPN9P43378 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PTPN9P43378 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PTPN9P43378 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTPN9P43378 AC011266.1-201ENST00000624119 3569 ntBASIC4.41□□□□□ -1.7
PTPN9P43378 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PTPN9P43378 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.41□□□□□ -1.7
PTPN9P43378 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.41□□□□□ -1.7
PTPN9P43378 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PTPN9P43378 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
PTPN9P43378 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
PTPN9P43378 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PTPN9P43378 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.4□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms