Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC245291.1-201ENST00000419501 328 ntBASIC3.54□□□□□ -1.84
SLC1A1P43005 AC012065.2-201ENST00000421295 375 ntBASIC3.54□□□□□ -1.84
SLC1A1P43005 NIPA2P1-201ENST00000426223 976 ntBASIC3.54□□□□□ -1.84
SLC1A1P43005 ATP5JP1-201ENST00000431631 322 ntBASIC3.54□□□□□ -1.84
SLC1A1P43005 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC1A1P43005 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC1A1P43005 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC1A1P43005 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC1A1P43005 AC068587.1-201ENST00000483613 781 ntBASIC3.54□□□□□ -1.84
SLC1A1P43005 AC106707.2-201ENST00000484182 374 ntBASIC3.54□□□□□ -1.84
SLC1A1P43005 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.54□□□□□ -1.84
SLC1A1P43005 FCF1P8-201ENST00000510322 597 ntBASIC3.54□□□□□ -1.84
SLC1A1P43005 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.54□□□□□ -1.84
SLC1A1P43005 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC1A1P43005 RN7SKP13-201ENST00000515933 244 ntBASIC3.54□□□□□ -1.84
SLC1A1P43005 RN7SKP234-201ENST00000517173 224 ntBASIC3.54□□□□□ -1.84
SLC1A1P43005 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.54□□□□□ -1.84
SLC1A1P43005 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC1A1P43005 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.54□□□□□ -1.84
SLC1A1P43005 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC1A1P43005 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC1A1P43005 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.54□□□□□ -1.84
SLC1A1P43005 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.54□□□□□ -1.84
SLC1A1P43005 AC112230.1-201ENST00000604342 547 ntBASIC3.54□□□□□ -1.84
SLC1A1P43005 KATNBL1P1-201ENST00000605192 748 ntBASIC3.54□□□□□ -1.84
SLC1A1P43005 AL121772.2-201ENST00000614331 297 ntBASIC3.54□□□□□ -1.84
SLC1A1P43005 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.54□□□□□ -1.84
SLC1A1P43005 SNORD39.4-201ENST00000620099 78 ntBASIC3.54□□□□□ -1.84
SLC1A1P43005 AL356321.1-201ENST00000621360 228 ntBASIC3.54□□□□□ -1.84
SLC1A1P43005 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.54□□□□□ -1.84
SLC1A1P43005 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SLC1A1P43005 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.54□□□□□ -1.84
SLC1A1P43005 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SLC1A1P43005 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SLC1A1P43005 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SLC1A1P43005 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SLC1A1P43005 RNA5SP383-201ENST00000362934 120 ntBASIC3.53□□□□□ -1.84
SLC1A1P43005 RNU6-805P-201ENST00000365643 106 ntBASIC3.53□□□□□ -1.84
SLC1A1P43005 SNORA57.1-201ENST00000391227 145 ntBASIC3.53□□□□□ -1.84
SLC1A1P43005 TAF9BP2-201ENST00000400856 499 ntBASIC3.53□□□□□ -1.84
SLC1A1P43005 RNU2-17P-201ENST00000410290 190 ntBASIC3.53□□□□□ -1.84
SLC1A1P43005 AL445584.1-201ENST00000431451 330 ntBASIC3.53□□□□□ -1.84
SLC1A1P43005 AL035246.1-201ENST00000433554 1255 ntBASIC3.53□□□□□ -1.84
SLC1A1P43005 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.53□□□□□ -1.84
SLC1A1P43005 HMGB3P11-201ENST00000440127 604 ntBASIC3.53□□□□□ -1.84
SLC1A1P43005 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.53□□□□□ -1.84
SLC1A1P43005 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.53□□□□□ -1.84
SLC1A1P43005 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.53□□□□□ -1.84
SLC1A1P43005 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.53□□□□□ -1.84
SLC1A1P43005 SNX5P1-201ENST00000505757 1041 ntBASIC3.53□□□□□ -1.84
SLC1A1P43005 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.53□□□□□ -1.84
SLC1A1P43005 RN7SKP283-201ENST00000517197 270 ntBASIC3.53□□□□□ -1.84
SLC1A1P43005 AC104027.1-201ENST00000521887 300 ntBASIC3.53□□□□□ -1.84
SLC1A1P43005 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.53□□□□□ -1.84
SLC1A1P43005 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.53□□□□□ -1.84
SLC1A1P43005 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SLC1A1P43005 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.53□□□□□ -1.84
SLC1A1P43005 AC084824.1-201ENST00000550917 1005 ntBASIC3.53□□□□□ -1.84
SLC1A1P43005 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.53□□□□□ -1.84
SLC1A1P43005 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.53□□□□□ -1.84
SLC1A1P43005 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SLC1A1P43005 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.53□□□□□ -1.84
SLC1A1P43005 AC239803.2-201ENST00000610161 430 ntBASIC3.53□□□□□ -1.84
SLC1A1P43005 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SLC1A1P43005 AC006065.5-201ENST00000623427 349 ntBASIC3.53□□□□□ -1.84
SLC1A1P43005 SNORA50A-202ENST00000629536 136 ntBASIC3.53□□□□□ -1.84
SLC1A1P43005 AC009093.8-201ENST00000641769 292 ntBASIC3.53□□□□□ -1.84
SLC1A1P43005 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
SLC1A1P43005 ZNF285B-201ENST00000561698 1767 ntBASIC3.53□□□□□ -1.84
SLC1A1P43005 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SLC1A1P43005 ZNF33CP-201ENST00000432492 2030 ntBASIC3.53□□□□□ -1.84
SLC1A1P43005 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SLC1A1P43005 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.52□□□□□ -1.85
SLC1A1P43005 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
SLC1A1P43005 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SLC1A1P43005 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
SLC1A1P43005 SNORA73.2-201ENST00000364946 201 ntBASIC3.52□□□□□ -1.85
SLC1A1P43005 SNORD51.1-201ENST00000365405 77 ntBASIC3.52□□□□□ -1.85
SLC1A1P43005 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SLC1A1P43005 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SLC1A1P43005 HMGB1P10-201ENST00000395823 563 ntBASIC3.52□□□□□ -1.85
SLC1A1P43005 SYF2P2-201ENST00000417620 583 ntBASIC3.52□□□□□ -1.85
SLC1A1P43005 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.52□□□□□ -1.85
SLC1A1P43005 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.52□□□□□ -1.85
SLC1A1P43005 GTF2IP23-201ENST00000423746 351 ntBASIC3.52□□□□□ -1.85
SLC1A1P43005 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.52□□□□□ -1.85
SLC1A1P43005 BX890604.2-201ENST00000427883 474 ntBASIC3.52□□□□□ -1.85
SLC1A1P43005 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.52□□□□□ -1.85
SLC1A1P43005 AC092641.1-201ENST00000440229 772 ntBASIC3.52□□□□□ -1.85
SLC1A1P43005 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.52□□□□□ -1.85
SLC1A1P43005 AC069540.1-201ENST00000446320 988 ntBASIC3.52□□□□□ -1.85
SLC1A1P43005 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.52□□□□□ -1.85
SLC1A1P43005 RPL7P15-201ENST00000461190 712 ntBASIC3.52□□□□□ -1.85
SLC1A1P43005 AC093663.2-201ENST00000484625 313 ntBASIC3.52□□□□□ -1.85
SLC1A1P43005 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.52□□□□□ -1.85
SLC1A1P43005 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.52□□□□□ -1.85
SLC1A1P43005 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SLC1A1P43005 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.52□□□□□ -1.85
SLC1A1P43005 AC104619.4-201ENST00000510773 249 ntBASIC3.52□□□□□ -1.85
SLC1A1P43005 AC005351.1-201ENST00000511152 786 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms