Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 ARF4P4-201ENST00000439608 520 ntBASIC3.81□□□□□ -1.8
TRIM23P36406 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM23P36406 ZNF736P1Y-201ENST00000440402 1276 ntBASIC3.81□□□□□ -1.8
TRIM23P36406 AC004865.1-201ENST00000442276 1003 ntBASIC3.81□□□□□ -1.8
TRIM23P36406 OR51B8P-201ENST00000449892 769 ntBASIC3.81□□□□□ -1.8
TRIM23P36406 PPIAP3-201ENST00000450588 505 ntBASIC3.81□□□□□ -1.8
TRIM23P36406 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM23P36406 CDC42P1-201ENST00000456658 548 ntBASIC3.81□□□□□ -1.8
TRIM23P36406 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.81□□□□□ -1.8
TRIM23P36406 snoU13.7-201ENST00000459220 104 ntBASIC3.81□□□□□ -1.8
TRIM23P36406 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.81□□□□□ -1.8
TRIM23P36406 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.81□□□□□ -1.8
TRIM23P36406 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.81□□□□□ -1.8
TRIM23P36406 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM23P36406 AP002812.1-201ENST00000495378 474 ntBASIC3.81□□□□□ -1.8
TRIM23P36406 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.81□□□□□ -1.8
TRIM23P36406 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM23P36406 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM23P36406 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM23P36406 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM23P36406 AP003066.2-201ENST00000529375 555 ntBASIC3.81□□□□□ -1.8
TRIM23P36406 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM23P36406 PDCL2P2-201ENST00000533651 189 ntBASIC3.81□□□□□ -1.8
TRIM23P36406 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM23P36406 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.81□□□□□ -1.8
TRIM23P36406 CENPUP2-201ENST00000555897 1186 ntBASIC3.81□□□□□ -1.8
TRIM23P36406 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM23P36406 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM23P36406 AC068620.3-201ENST00000602749 560 ntBASIC3.81□□□□□ -1.8
TRIM23P36406 AC005344.1-201ENST00000613391 459 ntBASIC3.81□□□□□ -1.8
TRIM23P36406 AL121772.2-201ENST00000614331 297 ntBASIC3.81□□□□□ -1.8
TRIM23P36406 MIR8058-201ENST00000615737 89 ntBASIC3.81□□□□□ -1.8
TRIM23P36406 XIST_intron.1-201ENST00000619444 68 ntBASIC3.81□□□□□ -1.8
TRIM23P36406 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM23P36406 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM23P36406 MIR4496-201ENST00000635896 61 ntBASIC3.81□□□□□ -1.8
TRIM23P36406 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
TRIM23P36406 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM23P36406 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.81□□□□□ -1.8
TRIM23P36406 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM23P36406 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.8□□□□□ -1.8
TRIM23P36406 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM23P36406 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM23P36406 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM23P36406 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM23P36406 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.8□□□□□ -1.8
TRIM23P36406 U8.11-201ENST00000384699 133 ntBASIC3.8□□□□□ -1.8
TRIM23P36406 U8.12-201ENST00000384701 133 ntBASIC3.8□□□□□ -1.8
TRIM23P36406 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
TRIM23P36406 PTMAP2-201ENST00000397627 327 ntBASIC3.8□□□□□ -1.8
TRIM23P36406 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.8□□□□□ -1.8
TRIM23P36406 MTCO3P31-201ENST00000405526 789 ntBASIC3.8□□□□□ -1.8
TRIM23P36406 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.8□□□□□ -1.8
TRIM23P36406 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.8□□□□□ -1.8
TRIM23P36406 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.8□□□□□ -1.8
TRIM23P36406 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM23P36406 AC011742.1-201ENST00000431448 434 ntBASIC3.8□□□□□ -1.8
TRIM23P36406 RPL21P110-201ENST00000433345 446 ntBASIC3.8□□□□□ -1.8
TRIM23P36406 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM23P36406 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM23P36406 AC000041.1-201ENST00000439655 175 ntBASIC3.8□□□□□ -1.8
TRIM23P36406 GXYLT1P1-201ENST00000446657 490 ntBASIC3.8□□□□□ -1.8
TRIM23P36406 AL133547.1-201ENST00000448546 220 ntBASIC3.8□□□□□ -1.8
TRIM23P36406 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.8□□□□□ -1.8
TRIM23P36406 U8.18-201ENST00000459285 133 ntBASIC3.8□□□□□ -1.8
TRIM23P36406 AL133162.1-201ENST00000463228 453 ntBASIC3.8□□□□□ -1.8
TRIM23P36406 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.8□□□□□ -1.8
TRIM23P36406 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM23P36406 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM23P36406 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM23P36406 PAICSP4-201ENST00000517543 1253 ntBASIC3.8□□□□□ -1.8
TRIM23P36406 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.8□□□□□ -1.8
TRIM23P36406 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.8□□□□□ -1.8
TRIM23P36406 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM23P36406 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.8□□□□□ -1.8
TRIM23P36406 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.8□□□□□ -1.8
TRIM23P36406 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.8□□□□□ -1.8
TRIM23P36406 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.8□□□□□ -1.8
TRIM23P36406 MIR4789-201ENST00000577469 82 ntBASIC3.8□□□□□ -1.8
TRIM23P36406 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.8□□□□□ -1.8
TRIM23P36406 MIR4444-1-201ENST00000581696 74 ntBASIC3.8□□□□□ -1.8
TRIM23P36406 MIR5187-201ENST00000583479 76 ntBASIC3.8□□□□□ -1.8
TRIM23P36406 MIR4444-2-201ENST00000584390 74 ntBASIC3.8□□□□□ -1.8
TRIM23P36406 AC008507.2-201ENST00000588402 1176 ntBASIC3.8□□□□□ -1.8
TRIM23P36406 AP002802.2-201ENST00000605877 235 ntBASIC3.8□□□□□ -1.8
TRIM23P36406 AL136370.1-201ENST00000608166 691 ntBASIC3.8□□□□□ -1.8
TRIM23P36406 AC006133.1-201ENST00000617106 264 ntBASIC3.8□□□□□ -1.8
TRIM23P36406 AC092628.2-201ENST00000622492 339 ntBASIC3.8□□□□□ -1.8
TRIM23P36406 AL109659.3-201ENST00000624985 950 ntBASIC3.8□□□□□ -1.8
TRIM23P36406 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.8□□□□□ -1.8
TRIM23P36406 AC012442.3-202ENST00000636742 206 ntBASIC3.8□□□□□ -1.8
TRIM23P36406 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM23P36406 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.8□□□□□ -1.8
TRIM23P36406 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
TRIM23P36406 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM23P36406 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
TRIM23P36406 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM23P36406 NMD3P1-201ENST00000439704 1488 ntBASIC3.79□□□□□ -1.8
TRIM23P36406 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM23P36406 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms