Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 MTCO1P8-201ENST00000416914 1523 ntBASIC4.63□□□□□ -1.67
CLIP1P30622 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.63□□□□□ -1.67
CLIP1P30622 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.63□□□□□ -1.67
CLIP1P30622 AL136360.1-201ENST00000503377 1900 ntBASIC4.63□□□□□ -1.67
CLIP1P30622 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CLIP1P30622 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLIP1P30622 RNA5SP126-201ENST00000365092 109 ntBASIC4.63□□□□□ -1.67
CLIP1P30622 HMGB3P23-201ENST00000414981 585 ntBASIC4.63□□□□□ -1.67
CLIP1P30622 RPL12P46-201ENST00000436610 195 ntBASIC4.63□□□□□ -1.67
CLIP1P30622 AL162389.1-201ENST00000449233 177 ntBASIC4.63□□□□□ -1.67
CLIP1P30622 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.63□□□□□ -1.67
CLIP1P30622 AC093278.1-201ENST00000494700 600 ntBASIC4.63□□□□□ -1.67
CLIP1P30622 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.63□□□□□ -1.67
CLIP1P30622 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.63□□□□□ -1.67
CLIP1P30622 AC107016.2-201ENST00000547968 190 ntBASIC4.63□□□□□ -1.67
CLIP1P30622 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.63□□□□□ -1.67
CLIP1P30622 AC007390.2-201ENST00000606229 3803 ntBASIC4.63□□□□□ -1.67
CLIP1P30622 PLCE1P1-201ENST00000622094 305 ntBASIC4.63□□□□□ -1.67
CLIP1P30622 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CLIP1P30622 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.62□□□□□ -1.67
CLIP1P30622 AC108206.1-201ENST00000570186 4159 ntBASIC4.62□□□□□ -1.67
CLIP1P30622 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.62□□□□□ -1.67
CLIP1P30622 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.62□□□□□ -1.67
CLIP1P30622 AC073069.1-201ENST00000428657 441 ntBASIC4.62□□□□□ -1.67
CLIP1P30622 METTL15P1-201ENST00000481421 1045 ntBASIC4.62□□□□□ -1.67
CLIP1P30622 HMGB1P3-201ENST00000502802 616 ntBASIC4.62□□□□□ -1.67
CLIP1P30622 VN1R90P-201ENST00000595717 726 ntBASIC4.62□□□□□ -1.67
CLIP1P30622 AC110741.2-201ENST00000605278 268 ntBASIC4.62□□□□□ -1.67
CLIP1P30622 AC107294.1-201ENST00000609524 467 ntBASIC4.62□□□□□ -1.67
CLIP1P30622 AL359535.1-201ENST00000612100 1087 ntBASIC4.62□□□□□ -1.67
CLIP1P30622 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
CLIP1P30622 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLIP1P30622 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLIP1P30622 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLIP1P30622 RNA5SP274-201ENST00000410484 108 ntBASIC4.61□□□□□ -1.67
CLIP1P30622 AL592148.1-201ENST00000413568 445 ntBASIC4.61□□□□□ -1.67
CLIP1P30622 AC114967.1-201ENST00000504890 259 ntBASIC4.61□□□□□ -1.67
CLIP1P30622 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.61□□□□□ -1.67
CLIP1P30622 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.61□□□□□ -1.67
CLIP1P30622 COX6CP8-201ENST00000522620 226 ntBASIC4.61□□□□□ -1.67
CLIP1P30622 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.61□□□□□ -1.67
CLIP1P30622 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.61□□□□□ -1.67
CLIP1P30622 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.61□□□□□ -1.67
CLIP1P30622 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.61□□□□□ -1.67
CLIP1P30622 AC007619.2-201ENST00000605743 379 ntBASIC4.61□□□□□ -1.67
CLIP1P30622 AC013412.1-201ENST00000610687 192 ntBASIC4.61□□□□□ -1.67
CLIP1P30622 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC4.6□□□□□ -1.67
CLIP1P30622 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.6□□□□□ -1.67
CLIP1P30622 RNU1-87P-201ENST00000363727 170 ntBASIC4.6□□□□□ -1.67
CLIP1P30622 RN7SKP58-201ENST00000411010 305 ntBASIC4.6□□□□□ -1.67
CLIP1P30622 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.6□□□□□ -1.67
CLIP1P30622 RPL23AP4-201ENST00000427757 463 ntBASIC4.6□□□□□ -1.67
CLIP1P30622 KRTAP19-11P-201ENST00000439851 104 ntBASIC4.6□□□□□ -1.67
CLIP1P30622 AC125238.1-201ENST00000448842 249 ntBASIC4.6□□□□□ -1.67
CLIP1P30622 AL109933.2-201ENST00000452651 260 ntBASIC4.6□□□□□ -1.67
CLIP1P30622 AC002553.2-201ENST00000453217 340 ntBASIC4.6□□□□□ -1.67
CLIP1P30622 AC010468.1-201ENST00000461022 817 ntBASIC4.6□□□□□ -1.67
CLIP1P30622 AC008481.1-201ENST00000463278 396 ntBASIC4.6□□□□□ -1.67
CLIP1P30622 RPS27AP1-201ENST00000475545 471 ntBASIC4.6□□□□□ -1.67
CLIP1P30622 RPS26P24-201ENST00000497656 331 ntBASIC4.6□□□□□ -1.67
CLIP1P30622 RNU6ATAC39P-201ENST00000516309 149 ntBASIC4.6□□□□□ -1.67
CLIP1P30622 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.6□□□□□ -1.67
CLIP1P30622 AC011492.1-201ENST00000600023 315 ntBASIC4.6□□□□□ -1.67
CLIP1P30622 AC006840.1-201ENST00000623069 542 ntBASIC4.6□□□□□ -1.67
CLIP1P30622 THAP12P8-201ENST00000447914 2115 ntBASIC4.6□□□□□ -1.67
CLIP1P30622 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CLIP1P30622 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
CLIP1P30622 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CLIP1P30622 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
CLIP1P30622 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.59□□□□□ -1.67
CLIP1P30622 AL132656.3-201ENST00000606384 1595 ntBASIC4.59□□□□□ -1.67
CLIP1P30622 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
CLIP1P30622 MIR708-201ENST00000390708 88 ntBASIC4.59□□□□□ -1.67
CLIP1P30622 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.59□□□□□ -1.67
CLIP1P30622 RN7SL75P-201ENST00000461926 281 ntBASIC4.59□□□□□ -1.67
CLIP1P30622 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.59□□□□□ -1.67
CLIP1P30622 SETP12-201ENST00000514068 805 ntBASIC4.59□□□□□ -1.67
CLIP1P30622 RPL12P22-201ENST00000519073 490 ntBASIC4.59□□□□□ -1.67
CLIP1P30622 AC245166.1-201ENST00000521012 253 ntBASIC4.59□□□□□ -1.67
CLIP1P30622 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.59□□□□□ -1.67
CLIP1P30622 AL365361.1-201ENST00000566942 3481 ntBASIC4.59□□□□□ -1.68
CLIP1P30622 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLIP1P30622 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLIP1P30622 RPS4XP8-201ENST00000402039 771 ntBASIC4.58□□□□□ -1.68
CLIP1P30622 AL583834.1-201ENST00000406943 343 ntBASIC4.58□□□□□ -1.68
CLIP1P30622 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.58□□□□□ -1.68
CLIP1P30622 AC111000.2-201ENST00000507775 550 ntBASIC4.58□□□□□ -1.68
CLIP1P30622 AC103783.1-201ENST00000520506 373 ntBASIC4.58□□□□□ -1.68
CLIP1P30622 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLIP1P30622 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC4.58□□□□□ -1.68
CLIP1P30622 AC078899.5-201ENST00000612475 178 ntBASIC4.58□□□□□ -1.68
CLIP1P30622 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLIP1P30622 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.58□□□□□ -1.68
CLIP1P30622 AC093908.1-201ENST00000623125 8092 ntBASIC4.58□□□□□ -1.68
CLIP1P30622 AC019097.1-201ENST00000424783 735 ntBASIC4.57□□□□□ -1.68
CLIP1P30622 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.57□□□□□ -1.68
CLIP1P30622 RPL29P29-201ENST00000448725 423 ntBASIC4.57□□□□□ -1.68
CLIP1P30622 DNAJC19P8-201ENST00000452887 259 ntBASIC4.57□□□□□ -1.68
CLIP1P30622 SCGB1D5P-201ENST00000515134 247 ntBASIC4.57□□□□□ -1.68
CLIP1P30622 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms