Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
VARSP26640 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
VARSP26640 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VARSP26640 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VARSP26640 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
VARSP26640 Y_RNA.2-201ENST00000362330 96 ntBASIC6.42□□□□□ -1.38
VARSP26640 RNU1-5P-201ENST00000362684 144 ntBASIC6.42□□□□□ -1.38
VARSP26640 RNA5SP258-201ENST00000362750 119 ntBASIC6.42□□□□□ -1.38
VARSP26640 Y_RNA.150-201ENST00000363562 102 ntBASIC6.42□□□□□ -1.38
VARSP26640 Y_RNA.785-201ENST00000384290 109 ntBASIC6.42□□□□□ -1.38
VARSP26640 Y_RNA.562-201ENST00000384695 113 ntBASIC6.42□□□□□ -1.38
VARSP26640 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
VARSP26640 RN7SKP296-201ENST00000411185 341 ntBASIC6.42□□□□□ -1.38
VARSP26640 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC6.42□□□□□ -1.38
VARSP26640 AC114491.1-201ENST00000416095 246 ntBASIC6.42□□□□□ -1.38
VARSP26640 AC243428.1-201ENST00000421099 264 ntBASIC6.42□□□□□ -1.38
VARSP26640 MRPS18CP6-201ENST00000423587 223 ntBASIC6.42□□□□□ -1.38
VARSP26640 AL606753.1-201ENST00000427435 87 ntBASIC6.42□□□□□ -1.38
VARSP26640 AC011816.1-201ENST00000441346 546 ntBASIC6.42□□□□□ -1.38
VARSP26640 SNRPBP1-201ENST00000443634 282 ntBASIC6.42□□□□□ -1.38
VARSP26640 RAC1P7-201ENST00000445367 377 ntBASIC6.42□□□□□ -1.38
VARSP26640 RN7SL809P-201ENST00000482040 297 ntBASIC6.42□□□□□ -1.38
VARSP26640 AC022447.4-201ENST00000504053 364 ntBASIC6.42□□□□□ -1.38
VARSP26640 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.42□□□□□ -1.38
VARSP26640 SNX18P24-201ENST00000505249 671 ntBASIC6.42□□□□□ -1.38
VARSP26640 AC016559.2-201ENST00000510759 359 ntBASIC6.42□□□□□ -1.38
VARSP26640 IGKV2D-23-201ENST00000518179 286 ntBASIC6.42□□□□□ -1.38
VARSP26640 AC024224.1-201ENST00000538284 609 ntBASIC6.42□□□□□ -1.38
VARSP26640 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.42□□□□□ -1.38
VARSP26640 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.42□□□□□ -1.38
VARSP26640 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC6.42□□□□□ -1.38
VARSP26640 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.42□□□□□ -1.38
VARSP26640 RN7SL270P-201ENST00000579643 281 ntBASIC6.42□□□□□ -1.38
VARSP26640 COX6CP3-201ENST00000580869 223 ntBASIC6.42□□□□□ -1.38
VARSP26640 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.42□□□□□ -1.38
VARSP26640 AC012175.1-201ENST00000603755 531 ntBASIC6.42□□□□□ -1.38
VARSP26640 AC091193.1-201ENST00000604640 448 ntBASIC6.42□□□□□ -1.38
VARSP26640 AC010201.1-201ENST00000605051 540 ntBASIC6.42□□□□□ -1.38
VARSP26640 AC097467.4-201ENST00000605504 141 ntBASIC6.42□□□□□ -1.38
VARSP26640 MIR6806-201ENST00000622141 64 ntBASIC6.42□□□□□ -1.38
VARSP26640 AC091903.1-201ENST00000624322 454 ntBASIC6.42□□□□□ -1.38
VARSP26640 AP001052.1-201ENST00000626421 99 ntBASIC6.42□□□□□ -1.38
VARSP26640 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
VARSP26640 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
VARSP26640 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
VARSP26640 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.42□□□□□ -1.38
VARSP26640 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VARSP26640 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.42□□□□□ -1.38
VARSP26640 AC020633.1-201ENST00000468439 2247 ntBASIC6.42□□□□□ -1.38
VARSP26640 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VARSP26640 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
VARSP26640 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.42□□□□□ -1.38
VARSP26640 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC6.42□□□□□ -1.38
VARSP26640 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.42□□□□□ -1.38
VARSP26640 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
VARSP26640 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
VARSP26640 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
VARSP26640 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
VARSP26640 AC015799.1-201ENST00000622996 3122 ntBASIC6.41□□□□□ -1.38
VARSP26640 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
VARSP26640 DOCK11P1-201ENST00000553480 5932 ntBASIC6.41□□□□□ -1.38
VARSP26640 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
VARSP26640 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
VARSP26640 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
VARSP26640 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.41□□□□□ -1.38
VARSP26640 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
VARSP26640 TPTE2P4-201ENST00000258589 1605 ntBASIC6.41□□□□□ -1.38
VARSP26640 OR56A5-201ENST00000340110 738 ntBASIC6.41□□□□□ -1.38
VARSP26640 STAG3L4-201ENST00000352103 530 ntBASIC6.41□□□□□ -1.38
VARSP26640 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC6.41□□□□□ -1.38
VARSP26640 Y_RNA.291-201ENST00000364886 113 ntBASIC6.41□□□□□ -1.38
VARSP26640 RNU6-61P-201ENST00000365528 109 ntBASIC6.41□□□□□ -1.38
VARSP26640 SNORA24.1-201ENST00000384401 135 ntBASIC6.41□□□□□ -1.38
VARSP26640 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
VARSP26640 AC115283.1-201ENST00000427353 400 ntBASIC6.41□□□□□ -1.38
VARSP26640 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.41□□□□□ -1.38
VARSP26640 GAPDHP20-201ENST00000444107 1007 ntBASIC6.41□□□□□ -1.38
VARSP26640 EEF1B2P3-201ENST00000447718 678 ntBASIC6.41□□□□□ -1.38
VARSP26640 AL121578.2-201ENST00000448797 447 ntBASIC6.41□□□□□ -1.38
VARSP26640 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.41□□□□□ -1.38
VARSP26640 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.41□□□□□ -1.38
VARSP26640 AC005008.1-201ENST00000456151 612 ntBASIC6.41□□□□□ -1.38
VARSP26640 AL445687.2-201ENST00000458156 728 ntBASIC6.41□□□□□ -1.38
VARSP26640 AC116533.1-201ENST00000459748 321 ntBASIC6.41□□□□□ -1.38
VARSP26640 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC6.41□□□□□ -1.38
VARSP26640 RNU6-111P-201ENST00000517179 105 ntBASIC6.41□□□□□ -1.38
VARSP26640 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC6.41□□□□□ -1.38
VARSP26640 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
VARSP26640 RPA2P1-201ENST00000556557 721 ntBASIC6.41□□□□□ -1.38
VARSP26640 AC106785.4-201ENST00000569492 412 ntBASIC6.41□□□□□ -1.38
VARSP26640 AC024619.4-201ENST00000580924 316 ntBASIC6.41□□□□□ -1.38
VARSP26640 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC6.41□□□□□ -1.38
VARSP26640 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.41□□□□□ -1.38
VARSP26640 FTX_2.1-201ENST00000618816 94 ntBASIC6.41□□□□□ -1.38
VARSP26640 MIR7854-201ENST00000620068 65 ntBASIC6.41□□□□□ -1.38
VARSP26640 AC055839.1-201ENST00000634467 498 ntBASIC6.41□□□□□ -1.38
VARSP26640 U6.104-201ENST00000637979 90 ntBASIC6.41□□□□□ -1.38
VARSP26640 HSPD1P8-201ENST00000400121 1658 ntBASIC6.41□□□□□ -1.38
VARSP26640 AC016583.1-201ENST00000624221 2431 ntBASIC6.41□□□□□ -1.38
VARSP26640 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms