Protein–RNA interactions for Protein: P23468

PTPRD, Receptor-type tyrosine-protein phosphatase delta, humanhuman

Predictions only

Length 1,912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRDP23468 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PTPRDP23468 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.11□□□□□ -1.91
PTPRDP23468 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PTPRDP23468 XGY1-201ENST00000381172 446 ntBASIC3.11□□□□□ -1.91
PTPRDP23468 AC110754.1-201ENST00000399740 601 ntBASIC3.11□□□□□ -1.91
PTPRDP23468 AC245291.1-201ENST00000419501 328 ntBASIC3.11□□□□□ -1.91
PTPRDP23468 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.11□□□□□ -1.91
PTPRDP23468 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.11□□□□□ -1.91
PTPRDP23468 AC008481.1-201ENST00000463278 396 ntBASIC3.11□□□□□ -1.91
PTPRDP23468 AC034159.1-201ENST00000513885 583 ntBASIC3.11□□□□□ -1.91
PTPRDP23468 RN7SKP43-201ENST00000516173 320 ntBASIC3.11□□□□□ -1.91
PTPRDP23468 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PTPRDP23468 MIR3162-201ENST00000581818 82 ntBASIC3.11□□□□□ -1.91
PTPRDP23468 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PTPRDP23468 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PTPRDP23468 RIOK3P1-201ENST00000418778 1528 ntBASIC3.11□□□□□ -1.91
PTPRDP23468 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
PTPRDP23468 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PTPRDP23468 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.11□□□□□ -1.91
PTPRDP23468 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PTPRDP23468 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PTPRDP23468 AL592494.2-201ENST00000425455 1548 ntBASIC3.11□□□□□ -1.91
PTPRDP23468 RNA5SP383-201ENST00000362934 120 ntBASIC3.11□□□□□ -1.91
PTPRDP23468 RNU6-805P-201ENST00000365643 106 ntBASIC3.11□□□□□ -1.91
PTPRDP23468 RPL21P3-201ENST00000395517 478 ntBASIC3.11□□□□□ -1.91
PTPRDP23468 AC146507.2-201ENST00000460608 476 ntBASIC3.11□□□□□ -1.91
PTPRDP23468 ST13P14-201ENST00000474095 734 ntBASIC3.11□□□□□ -1.91
PTPRDP23468 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.11□□□□□ -1.91
PTPRDP23468 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC3.11□□□□□ -1.91
PTPRDP23468 AL713922.2-201ENST00000619384 716 ntBASIC3.11□□□□□ -1.91
PTPRDP23468 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.11□□□□□ -1.91
PTPRDP23468 AC095050.2-201ENST00000510748 1458 ntBASIC3.1□□□□□ -1.91
PTPRDP23468 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.1□□□□□ -1.91
PTPRDP23468 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.1□□□□□ -1.91
PTPRDP23468 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.1□□□□□ -1.91
PTPRDP23468 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.1□□□□□ -1.91
PTPRDP23468 AC013410.1-201ENST00000436223 1232 ntBASIC3.1□□□□□ -1.91
PTPRDP23468 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.1□□□□□ -1.91
PTPRDP23468 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PTPRDP23468 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.1□□□□□ -1.91
PTPRDP23468 AC027309.2-201ENST00000520566 192 ntBASIC3.1□□□□□ -1.91
PTPRDP23468 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.1□□□□□ -1.91
PTPRDP23468 AC009101.1-201ENST00000568135 242 ntBASIC3.1□□□□□ -1.91
PTPRDP23468 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.1□□□□□ -1.91
PTPRDP23468 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.1□□□□□ -1.91
PTPRDP23468 VN1R79P-201ENST00000593540 513 ntBASIC3.1□□□□□ -1.91
PTPRDP23468 AC007566.2-201ENST00000603642 413 ntBASIC3.1□□□□□ -1.91
PTPRDP23468 AC017076.1-201ENST00000607613 578 ntBASIC3.1□□□□□ -1.91
PTPRDP23468 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
PTPRDP23468 NACA3P-201ENST00000359690 648 ntBASIC3.09□□□□□ -1.91
PTPRDP23468 RNU6-301P-201ENST00000384277 107 ntBASIC3.09□□□□□ -1.91
PTPRDP23468 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.09□□□□□ -1.91
PTPRDP23468 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PTPRDP23468 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.09□□□□□ -1.91
PTPRDP23468 AC140076.1-201ENST00000449897 361 ntBASIC3.09□□□□□ -1.91
PTPRDP23468 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.09□□□□□ -1.91
PTPRDP23468 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PTPRDP23468 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PTPRDP23468 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PTPRDP23468 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.92
PTPRDP23468 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.09□□□□□ -1.92
PTPRDP23468 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
PTPRDP23468 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
PTPRDP23468 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
PTPRDP23468 MIR449A-201ENST00000362113 91 ntBASIC3.09□□□□□ -1.92
PTPRDP23468 AL139095.1-201ENST00000404326 391 ntBASIC3.09□□□□□ -1.92
PTPRDP23468 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.09□□□□□ -1.92
PTPRDP23468 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.09□□□□□ -1.92
PTPRDP23468 AL445528.1-201ENST00000426330 420 ntBASIC3.09□□□□□ -1.92
PTPRDP23468 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.09□□□□□ -1.92
PTPRDP23468 S100A11P1-201ENST00000477525 312 ntBASIC3.09□□□□□ -1.92
PTPRDP23468 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.92
PTPRDP23468 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.09□□□□□ -1.92
PTPRDP23468 SNORA31.21-201ENST00000517180 77 ntBASIC3.09□□□□□ -1.92
PTPRDP23468 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.09□□□□□ -1.92
PTPRDP23468 PLCE1P1-201ENST00000622094 305 ntBASIC3.09□□□□□ -1.92
PTPRDP23468 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.08□□□□□ -1.92
PTPRDP23468 Z73965.1-201ENST00000623412 2297 ntBASIC3.08□□□□□ -1.92
PTPRDP23468 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PTPRDP23468 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PTPRDP23468 AC245100.2-201ENST00000454544 1679 ntBASIC3.08□□□□□ -1.92
PTPRDP23468 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.08□□□□□ -1.92
PTPRDP23468 AC245054.2-201ENST00000415639 319 ntBASIC3.08□□□□□ -1.92
PTPRDP23468 FTH1P25-201ENST00000447665 469 ntBASIC3.08□□□□□ -1.92
PTPRDP23468 RN7SL429P-201ENST00000479090 223 ntBASIC3.08□□□□□ -1.92
PTPRDP23468 RN7SL489P-201ENST00000486185 223 ntBASIC3.08□□□□□ -1.92
PTPRDP23468 RN7SL327P-201ENST00000488659 223 ntBASIC3.08□□□□□ -1.92
PTPRDP23468 VTA1P2-201ENST00000520205 911 ntBASIC3.08□□□□□ -1.92
PTPRDP23468 AC245166.1-201ENST00000521012 253 ntBASIC3.08□□□□□ -1.92
PTPRDP23468 PDCD5P1-201ENST00000543528 309 ntBASIC3.08□□□□□ -1.92
PTPRDP23468 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.08□□□□□ -1.92
PTPRDP23468 HMGB1P6-201ENST00000569046 646 ntBASIC3.08□□□□□ -1.92
PTPRDP23468 MIR4319-201ENST00000577285 85 ntBASIC3.08□□□□□ -1.92
PTPRDP23468 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.08□□□□□ -1.92
PTPRDP23468 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.08□□□□□ -1.92
PTPRDP23468 AC004825.2-201ENST00000616634 455 ntBASIC3.08□□□□□ -1.92
PTPRDP23468 RN7SL853P-201ENST00000617250 223 ntBASIC3.08□□□□□ -1.92
PTPRDP23468 AC007318.2-201ENST00000620999 243 ntBASIC3.08□□□□□ -1.92
PTPRDP23468 MIR7153-201ENST00000637758 57 ntBASIC3.08□□□□□ -1.92
PTPRDP23468 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms