Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC5.7□□□□□ -1.5
NID1P14543 AL512782.1-201ENST00000603093 364 ntBASIC5.7□□□□□ -1.5
NID1P14543 AC092747.3-201ENST00000603769 301 ntBASIC5.7□□□□□ -1.5
NID1P14543 AL627230.1-201ENST00000613077 211 ntBASIC5.7□□□□□ -1.5
NID1P14543 AL137067.2-201ENST00000621202 131 ntBASIC5.7□□□□□ -1.5
NID1P14543 AC022400.9-201ENST00000623633 273 ntBASIC5.7□□□□□ -1.5
NID1P14543 AC018628.1-201ENST00000624147 3819 ntBASIC5.7□□□□□ -1.5
NID1P14543 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
NID1P14543 AKAP17BP-201ENST00000431706 2719 ntBASIC5.7□□□□□ -1.5
NID1P14543 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
NID1P14543 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
NID1P14543 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.7□□□□□ -1.5
NID1P14543 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NID1P14543 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NID1P14543 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NID1P14543 AC092724.1-201ENST00000624623 3397 ntBASIC5.7□□□□□ -1.5
NID1P14543 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NID1P14543 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NID1P14543 AC024651.2-201ENST00000562480 2098 ntBASIC5.7□□□□□ -1.5
NID1P14543 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
NID1P14543 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
NID1P14543 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.69□□□□□ -1.5
NID1P14543 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NID1P14543 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.69□□□□□ -1.5
NID1P14543 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
NID1P14543 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NID1P14543 AL731532.1-201ENST00000623972 4236 ntBASIC5.69□□□□□ -1.5
NID1P14543 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NID1P14543 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NID1P14543 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.69□□□□□ -1.5
NID1P14543 RNU1-59P-201ENST00000364829 162 ntBASIC5.69□□□□□ -1.5
NID1P14543 Y_RNA.380-201ENST00000365663 111 ntBASIC5.69□□□□□ -1.5
NID1P14543 RHOT1P2-201ENST00000366423 333 ntBASIC5.69□□□□□ -1.5
NID1P14543 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NID1P14543 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.69□□□□□ -1.5
NID1P14543 RNU6-641P-201ENST00000384006 107 ntBASIC5.69□□□□□ -1.5
NID1P14543 RNU6-823P-201ENST00000391042 103 ntBASIC5.69□□□□□ -1.5
NID1P14543 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NID1P14543 AL035422.1-201ENST00000414193 397 ntBASIC5.69□□□□□ -1.5
NID1P14543 AL354707.3-201ENST00000427308 331 ntBASIC5.69□□□□□ -1.5
NID1P14543 RPSAP65-201ENST00000429660 595 ntBASIC5.69□□□□□ -1.5
NID1P14543 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.69□□□□□ -1.5
NID1P14543 AC094019.1-201ENST00000434678 472 ntBASIC5.69□□□□□ -1.5
NID1P14543 CBX1P4-201ENST00000439415 457 ntBASIC5.69□□□□□ -1.5
NID1P14543 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.69□□□□□ -1.5
NID1P14543 OR1H1P-201ENST00000448731 937 ntBASIC5.69□□□□□ -1.5
NID1P14543 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.69□□□□□ -1.5
NID1P14543 AL445687.2-201ENST00000458156 728 ntBASIC5.69□□□□□ -1.5
NID1P14543 AC008526.1-201ENST00000509149 338 ntBASIC5.69□□□□□ -1.5
NID1P14543 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC5.69□□□□□ -1.5
NID1P14543 RNU6-470P-201ENST00000515954 104 ntBASIC5.69□□□□□ -1.5
NID1P14543 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.69□□□□□ -1.5
NID1P14543 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
NID1P14543 MIR5583-1-201ENST00000580941 59 ntBASIC5.69□□□□□ -1.5
NID1P14543 MIR4701-201ENST00000583094 63 ntBASIC5.69□□□□□ -1.5
NID1P14543 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.69□□□□□ -1.5
NID1P14543 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.69□□□□□ -1.5
NID1P14543 U1.25-201ENST00000614085 162 ntBASIC5.69□□□□□ -1.5
NID1P14543 AL355365.1-201ENST00000616480 294 ntBASIC5.69□□□□□ -1.5
NID1P14543 U1.34-201ENST00000618578 162 ntBASIC5.69□□□□□ -1.5
NID1P14543 U1.31-201ENST00000620022 160 ntBASIC5.69□□□□□ -1.5
NID1P14543 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.69□□□□□ -1.5
NID1P14543 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NID1P14543 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NID1P14543 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
NID1P14543 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.69□□□□□ -1.5
NID1P14543 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.69□□□□□ -1.5
NID1P14543 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NID1P14543 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
NID1P14543 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.69□□□□□ -1.5
NID1P14543 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
NID1P14543 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NID1P14543 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NID1P14543 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NID1P14543 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NID1P14543 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NID1P14543 AL121768.1-201ENST00000613917 2544 ntBASIC5.69□□□□□ -1.5
NID1P14543 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NID1P14543 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.69□□□□□ -1.5
NID1P14543 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NID1P14543 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
NID1P14543 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NID1P14543 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
NID1P14543 MTND5P7-201ENST00000413558 1798 ntBASIC5.68□□□□□ -1.5
NID1P14543 DHX40P1-201ENST00000588725 1412 ntBASIC5.68□□□□□ -1.5
NID1P14543 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.68□□□□□ -1.5
NID1P14543 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NID1P14543 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NID1P14543 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC5.68□□□□□ -1.5
NID1P14543 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
NID1P14543 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
NID1P14543 RNU6-28P-201ENST00000362378 107 ntBASIC5.68□□□□□ -1.5
NID1P14543 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NID1P14543 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
NID1P14543 RNU6-472P-201ENST00000384299 107 ntBASIC5.68□□□□□ -1.5
NID1P14543 RPL23AP17-201ENST00000401064 499 ntBASIC5.68□□□□□ -1.5
NID1P14543 AL109755.1-201ENST00000401791 649 ntBASIC5.68□□□□□ -1.5
NID1P14543 POLHP1-201ENST00000411806 470 ntBASIC5.68□□□□□ -1.5
NID1P14543 AL133384.1-201ENST00000412744 351 ntBASIC5.68□□□□□ -1.5
NID1P14543 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms