Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RN7SKP224-201ENST00000364140 325 ntBASIC5.18□□□□□ -1.58
COL6A2P12110 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
COL6A2P12110 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.18□□□□□ -1.58
COL6A2P12110 MTCO2P5-201ENST00000422621 426 ntBASIC5.18□□□□□ -1.58
COL6A2P12110 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.18□□□□□ -1.58
COL6A2P12110 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.18□□□□□ -1.58
COL6A2P12110 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.18□□□□□ -1.58
COL6A2P12110 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.18□□□□□ -1.58
COL6A2P12110 RPL36AP39-201ENST00000445859 318 ntBASIC5.18□□□□□ -1.58
COL6A2P12110 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.18□□□□□ -1.58
COL6A2P12110 MTND1P11-201ENST00000456661 876 ntBASIC5.18□□□□□ -1.58
COL6A2P12110 AP000942.1-201ENST00000463969 747 ntBASIC5.18□□□□□ -1.58
COL6A2P12110 RN7SL51P-201ENST00000468230 285 ntBASIC5.18□□□□□ -1.58
COL6A2P12110 AC007998.1-201ENST00000474156 672 ntBASIC5.18□□□□□ -1.58
COL6A2P12110 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.18□□□□□ -1.58
COL6A2P12110 AC008628.2-201ENST00000502605 298 ntBASIC5.18□□□□□ -1.58
COL6A2P12110 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
COL6A2P12110 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.18□□□□□ -1.58
COL6A2P12110 AP006245.2-201ENST00000522004 300 ntBASIC5.18□□□□□ -1.58
COL6A2P12110 AC022861.1-201ENST00000522981 663 ntBASIC5.18□□□□□ -1.58
COL6A2P12110 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC5.18□□□□□ -1.58
COL6A2P12110 AC104383.1-201ENST00000530297 370 ntBASIC5.18□□□□□ -1.58
COL6A2P12110 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL6A2P12110 AL512360.1-201ENST00000555346 234 ntBASIC5.18□□□□□ -1.58
COL6A2P12110 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.18□□□□□ -1.58
COL6A2P12110 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.18□□□□□ -1.58
COL6A2P12110 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.18□□□□□ -1.58
COL6A2P12110 AL353997.4-201ENST00000586196 166 ntBASIC5.18□□□□□ -1.58
COL6A2P12110 AC060780.3-201ENST00000589464 80 ntBASIC5.18□□□□□ -1.58
COL6A2P12110 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.18□□□□□ -1.58
COL6A2P12110 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.18□□□□□ -1.58
COL6A2P12110 AC011468.4-201ENST00000603942 409 ntBASIC5.18□□□□□ -1.58
COL6A2P12110 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.18□□□□□ -1.58
COL6A2P12110 AC118658.2-201ENST00000618697 459 ntBASIC5.18□□□□□ -1.58
COL6A2P12110 AC004009.2-201ENST00000623016 728 ntBASIC5.18□□□□□ -1.58
COL6A2P12110 AC074101.1-201ENST00000637861 241 ntBASIC5.18□□□□□ -1.58
COL6A2P12110 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.18□□□□□ -1.58
COL6A2P12110 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
COL6A2P12110 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL6A2P12110 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL6A2P12110 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL6A2P12110 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COL6A2P12110 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.17□□□□□ -1.58
COL6A2P12110 AC017104.4-201ENST00000636283 1592 ntBASIC5.17□□□□□ -1.58
COL6A2P12110 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL6A2P12110 ERCC6-202ENST00000374127 1782 ntBASIC5.17□□□□□ -1.58
COL6A2P12110 AC100778.3-201ENST00000580060 1750 ntBASIC5.17□□□□□ -1.58
COL6A2P12110 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
COL6A2P12110 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.17□□□□□ -1.58
COL6A2P12110 RNA5SP319-201ENST00000362768 119 ntBASIC5.17□□□□□ -1.58
COL6A2P12110 Y_RNA.61-201ENST00000362835 102 ntBASIC5.17□□□□□ -1.58
COL6A2P12110 RNU6-343P-201ENST00000364709 104 ntBASIC5.17□□□□□ -1.58
COL6A2P12110 RNU6-730P-201ENST00000383954 104 ntBASIC5.17□□□□□ -1.58
COL6A2P12110 Y_RNA.481-201ENST00000384373 102 ntBASIC5.17□□□□□ -1.58
COL6A2P12110 RNA5SP284-201ENST00000384547 118 ntBASIC5.17□□□□□ -1.58
COL6A2P12110 AC016769.3-201ENST00000396562 315 ntBASIC5.17□□□□□ -1.58
COL6A2P12110 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.17□□□□□ -1.58
COL6A2P12110 RN7SKP286-201ENST00000410894 299 ntBASIC5.17□□□□□ -1.58
COL6A2P12110 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC5.17□□□□□ -1.58
COL6A2P12110 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.17□□□□□ -1.58
COL6A2P12110 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.17□□□□□ -1.58
COL6A2P12110 RPL7P57-201ENST00000423238 740 ntBASIC5.17□□□□□ -1.58
COL6A2P12110 AC133104.1-201ENST00000429100 218 ntBASIC5.17□□□□□ -1.58
COL6A2P12110 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.17□□□□□ -1.58
COL6A2P12110 RPL36P19-201ENST00000430744 301 ntBASIC5.17□□□□□ -1.58
COL6A2P12110 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.17□□□□□ -1.58
COL6A2P12110 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.17□□□□□ -1.58
COL6A2P12110 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.17□□□□□ -1.58
COL6A2P12110 AC092013.1-201ENST00000438795 332 ntBASIC5.17□□□□□ -1.58
COL6A2P12110 USP9YP8-201ENST00000441913 500 ntBASIC5.17□□□□□ -1.58
COL6A2P12110 FAM103A2P-201ENST00000444122 354 ntBASIC5.17□□□□□ -1.58
COL6A2P12110 SBDSP1-204ENST00000453858 737 ntBASIC5.17□□□□□ -1.58
COL6A2P12110 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.17□□□□□ -1.58
COL6A2P12110 AMD1P1-201ENST00000457220 922 ntBASIC5.17□□□□□ -1.58
COL6A2P12110 PABPC1P3-201ENST00000469174 459 ntBASIC5.17□□□□□ -1.58
COL6A2P12110 RN7SL346P-201ENST00000491561 294 ntBASIC5.17□□□□□ -1.58
COL6A2P12110 AC034222.1-201ENST00000494052 532 ntBASIC5.17□□□□□ -1.58
COL6A2P12110 RNU6-875P-201ENST00000516488 106 ntBASIC5.17□□□□□ -1.58
COL6A2P12110 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.17□□□□□ -1.58
COL6A2P12110 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.17□□□□□ -1.58
COL6A2P12110 HMGB1P40-201ENST00000525121 540 ntBASIC5.17□□□□□ -1.58
COL6A2P12110 AP003181.2-201ENST00000528941 181 ntBASIC5.17□□□□□ -1.58
COL6A2P12110 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC5.17□□□□□ -1.58
COL6A2P12110 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.17□□□□□ -1.58
COL6A2P12110 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC5.17□□□□□ -1.58
COL6A2P12110 AC107954.1-201ENST00000565906 727 ntBASIC5.17□□□□□ -1.58
COL6A2P12110 MIR1273E-201ENST00000581165 102 ntBASIC5.17□□□□□ -1.58
COL6A2P12110 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.17□□□□□ -1.58
COL6A2P12110 AC011445.2-201ENST00000599274 173 ntBASIC5.17□□□□□ -1.58
COL6A2P12110 AL391646.1-201ENST00000603860 190 ntBASIC5.17□□□□□ -1.58
COL6A2P12110 AC123768.4-201ENST00000616244 701 ntBASIC5.17□□□□□ -1.58
COL6A2P12110 AC009237.17-201ENST00000618111 748 ntBASIC5.17□□□□□ -1.58
COL6A2P12110 AC009268.2-201ENST00000621925 457 ntBASIC5.17□□□□□ -1.58
COL6A2P12110 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.17□□□□□ -1.58
COL6A2P12110 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.17□□□□□ -1.58
COL6A2P12110 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.17□□□□□ -1.58
COL6A2P12110 AC131971.1-201ENST00000332881 1482 ntBASIC5.17□□□□□ -1.58
COL6A2P12110 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.17□□□□□ -1.58
COL6A2P12110 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COL6A2P12110 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms