Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CD28P10747 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CD28P10747 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.81□□□□□ -1.96
CD28P10747 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
CD28P10747 ENSAP3-201ENST00000312710 333 ntBASIC2.81□□□□□ -1.96
CD28P10747 RNU1-18P-201ENST00000363062 164 ntBASIC2.81□□□□□ -1.96
CD28P10747 RNU6-1293P-201ENST00000384077 107 ntBASIC2.81□□□□□ -1.96
CD28P10747 RNU6-796P-201ENST00000391086 107 ntBASIC2.81□□□□□ -1.96
CD28P10747 HMGN2P8-201ENST00000391458 268 ntBASIC2.81□□□□□ -1.96
CD28P10747 HMGB3P18-201ENST00000406327 590 ntBASIC2.81□□□□□ -1.96
CD28P10747 UBE2V1P11-201ENST00000411559 285 ntBASIC2.81□□□□□ -1.96
CD28P10747 NAP1L1P2-201ENST00000414182 1089 ntBASIC2.81□□□□□ -1.96
CD28P10747 HMGB3P20-201ENST00000417997 600 ntBASIC2.81□□□□□ -1.96
CD28P10747 AC008280.1-201ENST00000418851 412 ntBASIC2.81□□□□□ -1.96
CD28P10747 DBIP2-201ENST00000419076 262 ntBASIC2.81□□□□□ -1.96
CD28P10747 AC008065.1-201ENST00000428525 348 ntBASIC2.81□□□□□ -1.96
CD28P10747 AC073508.1-201ENST00000428866 656 ntBASIC2.81□□□□□ -1.96
CD28P10747 AC097713.2-201ENST00000430199 356 ntBASIC2.81□□□□□ -1.96
CD28P10747 ETF1P3-201ENST00000430422 1160 ntBASIC2.81□□□□□ -1.96
CD28P10747 AL365396.1-201ENST00000430854 671 ntBASIC2.81□□□□□ -1.96
CD28P10747 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.81□□□□□ -1.96
CD28P10747 HMGB1P48-201ENST00000446155 598 ntBASIC2.81□□□□□ -1.96
CD28P10747 AL353718.1-201ENST00000451028 517 ntBASIC2.81□□□□□ -1.96
CD28P10747 SNORD108-201ENST00000459332 71 ntBASIC2.81□□□□□ -1.96
CD28P10747 AC025518.1-201ENST00000479856 347 ntBASIC2.81□□□□□ -1.96
CD28P10747 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.81□□□□□ -1.96
CD28P10747 CAB39P1-201ENST00000502277 460 ntBASIC2.81□□□□□ -1.96
CD28P10747 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.81□□□□□ -1.96
CD28P10747 SNORA70.14-201ENST00000516205 110 ntBASIC2.81□□□□□ -1.96
CD28P10747 SNORA74D-201ENST00000516404 141 ntBASIC2.81□□□□□ -1.96
CD28P10747 RN7SKP234-201ENST00000517173 224 ntBASIC2.81□□□□□ -1.96
CD28P10747 LY96-202ENST00000518893 430 ntTSL 3 BASIC2.81□□□□□ -1.96
CD28P10747 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.81□□□□□ -1.96
CD28P10747 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.81□□□□□ -1.96
CD28P10747 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.81□□□□□ -1.96
CD28P10747 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC2.81□□□□□ -1.96
CD28P10747 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.81□□□□□ -1.96
CD28P10747 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CD28P10747 AC104229.1-201ENST00000561364 255 ntBASIC2.81□□□□□ -1.96
CD28P10747 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.81□□□□□ -1.96
CD28P10747 AC037471.2-201ENST00000564941 598 ntBASIC2.81□□□□□ -1.96
CD28P10747 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.81□□□□□ -1.96
CD28P10747 AC099489.2-201ENST00000574976 260 ntBASIC2.81□□□□□ -1.96
CD28P10747 AC090312.2-201ENST00000582687 378 ntBASIC2.81□□□□□ -1.96
CD28P10747 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CD28P10747 AC125494.3-201ENST00000602759 455 ntBASIC2.81□□□□□ -1.96
CD28P10747 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CD28P10747 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC2.81□□□□□ -1.96
CD28P10747 AL442067.2-201ENST00000614033 363 ntBASIC2.81□□□□□ -1.96
CD28P10747 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CD28P10747 AC069209.1-201ENST00000619282 651 ntBASIC2.81□□□□□ -1.96
CD28P10747 RNU6-156P-201ENST00000621869 107 ntBASIC2.81□□□□□ -1.96
CD28P10747 AC024595.1-201ENST00000623088 387 ntBASIC2.81□□□□□ -1.96
CD28P10747 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.81□□□□□ -1.96
CD28P10747 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
CD28P10747 DCAF13P1-201ENST00000495256 1330 ntBASIC2.81□□□□□ -1.96
CD28P10747 AC104446.1-201ENST00000613728 1321 ntBASIC2.81□□□□□ -1.96
CD28P10747 USP33-201ENST00000357428 4155 ntTSL 5 BASIC2.81□□□□□ -1.96
CD28P10747 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC2.81□□□□□ -1.96
CD28P10747 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CD28P10747 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CD28P10747 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CD28P10747 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CD28P10747 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CD28P10747 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CD28P10747 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CD28P10747 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CD28P10747 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
CD28P10747 XPOTP1-201ENST00000443317 2398 ntBASIC2.8□□□□□ -1.96
CD28P10747 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC2.8□□□□□ -1.96
CD28P10747 SEC63P2-201ENST00000503863 1939 ntBASIC2.8□□□□□ -1.96
CD28P10747 AC046144.1-201ENST00000478559 1853 ntBASIC2.8□□□□□ -1.96
CD28P10747 CEP170P1-201ENST00000502249 4587 ntBASIC2.8□□□□□ -1.96
CD28P10747 NMD3P1-201ENST00000439704 1488 ntBASIC2.8□□□□□ -1.96
CD28P10747 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CD28P10747 MFSD8-213ENST00000641134 1327 ntBASIC2.8□□□□□ -1.96
CD28P10747 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CD28P10747 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CD28P10747 RNA5SP267-201ENST00000364893 126 ntBASIC2.8□□□□□ -1.96
CD28P10747 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC2.8□□□□□ -1.96
CD28P10747 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
CD28P10747 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.8□□□□□ -1.96
CD28P10747 AC234772.1-201ENST00000377927 937 ntBASIC2.8□□□□□ -1.96
CD28P10747 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
CD28P10747 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CD28P10747 AC092745.2-202ENST00000411880 369 ntBASIC2.8□□□□□ -1.96
CD28P10747 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC2.8□□□□□ -1.96
CD28P10747 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC2.8□□□□□ -1.96
CD28P10747 AC092832.1-201ENST00000422934 400 ntBASIC2.8□□□□□ -1.96
CD28P10747 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.8□□□□□ -1.96
CD28P10747 RNFT1P2-201ENST00000443064 757 ntBASIC2.8□□□□□ -1.96
CD28P10747 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CD28P10747 RPL26P28-201ENST00000451325 435 ntBASIC2.8□□□□□ -1.96
CD28P10747 ANP32BP2-201ENST00000454525 545 ntBASIC2.8□□□□□ -1.96
CD28P10747 BX510359.1-201ENST00000456973 237 ntBASIC2.8□□□□□ -1.96
CD28P10747 RPL32P34-201ENST00000486380 400 ntBASIC2.8□□□□□ -1.96
CD28P10747 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.8□□□□□ -1.96
CD28P10747 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC2.8□□□□□ -1.96
CD28P10747 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.8□□□□□ -1.96
CD28P10747 AC008565.1-201ENST00000509046 885 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms