Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.38□□□□□ -1.71
RB1P06400 AC026403.1-201ENST00000518938 295 ntBASIC4.38□□□□□ -1.71
RB1P06400 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.38□□□□□ -1.71
RB1P06400 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.38□□□□□ -1.71
RB1P06400 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.38□□□□□ -1.71
RB1P06400 AC074051.3-201ENST00000570238 358 ntBASIC4.38□□□□□ -1.71
RB1P06400 MIR3912-201ENST00000577566 105 ntBASIC4.38□□□□□ -1.71
RB1P06400 AC115621.1-201ENST00000604653 858 ntBASIC4.38□□□□□ -1.71
RB1P06400 AC069545.1-201ENST00000605671 358 ntBASIC4.38□□□□□ -1.71
RB1P06400 AL158163.2-201ENST00000619110 700 ntBASIC4.38□□□□□ -1.71
RB1P06400 AL512506.2-201ENST00000624472 458 ntBASIC4.38□□□□□ -1.71
RB1P06400 OR5BE1P-202ENST00000641168 1176 ntBASIC4.38□□□□□ -1.71
RB1P06400 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RB1P06400 MTND5P28-201ENST00000438005 1594 ntBASIC4.38□□□□□ -1.71
RB1P06400 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RB1P06400 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RB1P06400 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.38□□□□□ -1.71
RB1P06400 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.38□□□□□ -1.71
RB1P06400 AL355578.1-201ENST00000607405 1328 ntBASIC4.38□□□□□ -1.71
RB1P06400 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.38□□□□□ -1.71
RB1P06400 AC011978.2-201ENST00000569835 2054 ntBASIC4.37□□□□□ -1.71
RB1P06400 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RB1P06400 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.37□□□□□ -1.71
RB1P06400 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.37□□□□□ -1.71
RB1P06400 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RB1P06400 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.37□□□□□ -1.71
RB1P06400 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RB1P06400 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.37□□□□□ -1.71
RB1P06400 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RB1P06400 IL6STP1-201ENST00000346911 1020 ntBASIC4.37□□□□□ -1.71
RB1P06400 RNU4-68P-201ENST00000364314 141 ntBASIC4.37□□□□□ -1.71
RB1P06400 U3.15-201ENST00000365398 212 ntBASIC4.37□□□□□ -1.71
RB1P06400 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.37□□□□□ -1.71
RB1P06400 SNORD96B-201ENST00000386148 79 ntBASIC4.37□□□□□ -1.71
RB1P06400 RNA5SP239-201ENST00000410218 129 ntBASIC4.37□□□□□ -1.71
RB1P06400 RN7SKP156-201ENST00000410308 342 ntBASIC4.37□□□□□ -1.71
RB1P06400 RPS3AP9-201ENST00000417027 792 ntBASIC4.37□□□□□ -1.71
RB1P06400 AL161631.1-201ENST00000417933 486 ntBASIC4.37□□□□□ -1.71
RB1P06400 PDSS1P1-201ENST00000422953 1114 ntBASIC4.37□□□□□ -1.71
RB1P06400 MOB1AP1-201ENST00000430903 535 ntBASIC4.37□□□□□ -1.71
RB1P06400 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.37□□□□□ -1.71
RB1P06400 B3GNT2P1-201ENST00000434960 952 ntBASIC4.37□□□□□ -1.71
RB1P06400 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.37□□□□□ -1.71
RB1P06400 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.37□□□□□ -1.71
RB1P06400 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.37□□□□□ -1.71
RB1P06400 RPS4XP15-201ENST00000489210 795 ntBASIC4.37□□□□□ -1.71
RB1P06400 AC084024.2-201ENST00000503480 791 ntBASIC4.37□□□□□ -1.71
RB1P06400 BOLA3P3-201ENST00000505182 232 ntBASIC4.37□□□□□ -1.71
RB1P06400 AC010460.2-201ENST00000509054 677 ntBASIC4.37□□□□□ -1.71
RB1P06400 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.37□□□□□ -1.71
RB1P06400 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.37□□□□□ -1.71
RB1P06400 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.37□□□□□ -1.71
RB1P06400 AC093519.1-201ENST00000566109 298 ntBASIC4.37□□□□□ -1.71
RB1P06400 AC015688.2-201ENST00000584523 262 ntBASIC4.37□□□□□ -1.71
RB1P06400 HSPE1P14-201ENST00000605812 302 ntBASIC4.37□□□□□ -1.71
RB1P06400 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.37□□□□□ -1.71
RB1P06400 AC019278.1-201ENST00000623516 479 ntBASIC4.37□□□□□ -1.71
RB1P06400 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.37□□□□□ -1.71
RB1P06400 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.37□□□□□ -1.71
RB1P06400 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RB1P06400 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RB1P06400 MTND4P10-201ENST00000446199 1363 ntBASIC4.37□□□□□ -1.71
RB1P06400 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.37□□□□□ -1.71
RB1P06400 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.37□□□□□ -1.71
RB1P06400 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
RB1P06400 AC099786.3-201ENST00000565735 1410 ntBASIC4.37□□□□□ -1.71
RB1P06400 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RB1P06400 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
RB1P06400 Z99496.1-201ENST00000469424 1477 ntBASIC4.37□□□□□ -1.71
RB1P06400 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
RB1P06400 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
RB1P06400 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
RB1P06400 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
RB1P06400 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RB1P06400 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RB1P06400 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
RB1P06400 OR4A15-201ENST00000314706 1035 ntBASIC4.36□□□□□ -1.71
RB1P06400 RNU6-1243P-201ENST00000364028 107 ntBASIC4.36□□□□□ -1.71
RB1P06400 RNU6-441P-201ENST00000384545 106 ntBASIC4.36□□□□□ -1.71
RB1P06400 MIR30B-201ENST00000384850 88 ntBASIC4.36□□□□□ -1.71
RB1P06400 ZNF603P-201ENST00000405613 487 ntBASIC4.36□□□□□ -1.71
RB1P06400 AL603766.1-201ENST00000407763 664 ntBASIC4.36□□□□□ -1.71
RB1P06400 RNA5SP146-201ENST00000410743 123 ntBASIC4.36□□□□□ -1.71
RB1P06400 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.36□□□□□ -1.71
RB1P06400 KRR1P1-201ENST00000419430 803 ntBASIC4.36□□□□□ -1.71
RB1P06400 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.36□□□□□ -1.71
RB1P06400 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.36□□□□□ -1.71
RB1P06400 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.36□□□□□ -1.71
RB1P06400 RPS6P12-201ENST00000432491 726 ntBASIC4.36□□□□□ -1.71
RB1P06400 RPS4XP4-201ENST00000443195 763 ntBASIC4.36□□□□□ -1.71
RB1P06400 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.36□□□□□ -1.71
RB1P06400 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.36□□□□□ -1.71
RB1P06400 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.36□□□□□ -1.71
RB1P06400 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.36□□□□□ -1.71
RB1P06400 AC091516.1-201ENST00000549191 703 ntBASIC4.36□□□□□ -1.71
RB1P06400 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.36□□□□□ -1.71
RB1P06400 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.36□□□□□ -1.71
RB1P06400 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RB1P06400 MIR5684-201ENST00000585074 65 ntBASIC4.36□□□□□ -1.71
RB1P06400 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms