Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DPB1P04440 NOTCH2P1-201ENST00000443481 624 ntBASIC3.12□□□□□ -1.91
HLA-DPB1P04440 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.12□□□□□ -1.91
HLA-DPB1P04440 MRPL35P4-201ENST00000453682 566 ntBASIC3.12□□□□□ -1.91
HLA-DPB1P04440 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DPB1P04440 AC104689.1-201ENST00000473356 768 ntBASIC3.12□□□□□ -1.91
HLA-DPB1P04440 ACTR3P3-201ENST00000480448 893 ntBASIC3.12□□□□□ -1.91
HLA-DPB1P04440 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DPB1P04440 AC068657.1-201ENST00000520807 306 ntBASIC3.12□□□□□ -1.91
HLA-DPB1P04440 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DPB1P04440 AC093331.1-201ENST00000521474 169 ntBASIC3.12□□□□□ -1.91
HLA-DPB1P04440 AC104027.1-201ENST00000521887 300 ntBASIC3.12□□□□□ -1.91
HLA-DPB1P04440 AC022790.1-201ENST00000522872 204 ntBASIC3.12□□□□□ -1.91
HLA-DPB1P04440 MED28P5-201ENST00000528254 438 ntBASIC3.12□□□□□ -1.91
HLA-DPB1P04440 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DPB1P04440 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.12□□□□□ -1.91
HLA-DPB1P04440 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.12□□□□□ -1.91
HLA-DPB1P04440 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.12□□□□□ -1.91
HLA-DPB1P04440 AP001180.3-201ENST00000582221 145 ntBASIC3.12□□□□□ -1.91
HLA-DPB1P04440 AL049634.3-201ENST00000604968 457 ntBASIC3.12□□□□□ -1.91
HLA-DPB1P04440 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DPB1P04440 AC107294.3-201ENST00000609211 526 ntBASIC3.12□□□□□ -1.91
HLA-DPB1P04440 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DPB1P04440 AL356863.1-201ENST00000623378 1080 ntBASIC3.12□□□□□ -1.91
HLA-DPB1P04440 ZNF542P-204ENST00000482727 1305 ntBASIC3.12□□□□□ -1.91
HLA-DPB1P04440 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DPB1P04440 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DPB1P04440 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.11□□□□□ -1.91
HLA-DPB1P04440 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.11□□□□□ -1.91
HLA-DPB1P04440 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DPB1P04440 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DPB1P04440 SNORD56.4-201ENST00000363883 71 ntBASIC3.11□□□□□ -1.91
HLA-DPB1P04440 RNA5SP51-201ENST00000364750 119 ntBASIC3.11□□□□□ -1.91
HLA-DPB1P04440 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
HLA-DPB1P04440 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DPB1P04440 RNU6-481P-201ENST00000384194 107 ntBASIC3.11□□□□□ -1.91
HLA-DPB1P04440 MIR554-201ENST00000384874 96 ntBASIC3.11□□□□□ -1.91
HLA-DPB1P04440 AC007066.1-201ENST00000392902 381 ntBASIC3.11□□□□□ -1.91
HLA-DPB1P04440 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DPB1P04440 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
HLA-DPB1P04440 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.11□□□□□ -1.91
HLA-DPB1P04440 RNU2-21P-201ENST00000410368 188 ntBASIC3.11□□□□□ -1.91
HLA-DPB1P04440 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.11□□□□□ -1.91
HLA-DPB1P04440 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.11□□□□□ -1.91
HLA-DPB1P04440 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.11□□□□□ -1.91
HLA-DPB1P04440 AL035423.1-201ENST00000420331 213 ntBASIC3.11□□□□□ -1.91
HLA-DPB1P04440 AC245054.1-201ENST00000420944 258 ntBASIC3.11□□□□□ -1.91
HLA-DPB1P04440 AL121882.1-201ENST00000422893 417 ntBASIC3.11□□□□□ -1.91
HLA-DPB1P04440 ETF1P3-201ENST00000430422 1160 ntBASIC3.11□□□□□ -1.91
HLA-DPB1P04440 RPL17P35-201ENST00000432217 549 ntBASIC3.11□□□□□ -1.91
HLA-DPB1P04440 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.11□□□□□ -1.91
HLA-DPB1P04440 AC023347.2-201ENST00000433994 462 ntBASIC3.11□□□□□ -1.91
HLA-DPB1P04440 ISCA1P2-201ENST00000438679 421 ntBASIC3.11□□□□□ -1.91
HLA-DPB1P04440 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.11□□□□□ -1.91
HLA-DPB1P04440 AC114967.1-201ENST00000504890 259 ntBASIC3.11□□□□□ -1.91
HLA-DPB1P04440 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.11□□□□□ -1.91
HLA-DPB1P04440 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.11□□□□□ -1.91
HLA-DPB1P04440 PHBP14-201ENST00000512887 367 ntBASIC3.11□□□□□ -1.91
HLA-DPB1P04440 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.11□□□□□ -1.91
HLA-DPB1P04440 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.11□□□□□ -1.91
HLA-DPB1P04440 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
HLA-DPB1P04440 AC125494.3-201ENST00000602759 455 ntBASIC3.11□□□□□ -1.91
HLA-DPB1P04440 AC005776.1-201ENST00000603164 290 ntBASIC3.11□□□□□ -1.91
HLA-DPB1P04440 AC010680.4-201ENST00000605334 543 ntBASIC3.11□□□□□ -1.91
HLA-DPB1P04440 AL109618.2-201ENST00000605527 211 ntBASIC3.11□□□□□ -1.91
HLA-DPB1P04440 AP003117.2-201ENST00000606010 545 ntBASIC3.11□□□□□ -1.91
HLA-DPB1P04440 AC073569.3-201ENST00000619055 682 ntBASIC3.11□□□□□ -1.91
HLA-DPB1P04440 AC092628.2-201ENST00000622492 339 ntBASIC3.11□□□□□ -1.91
HLA-DPB1P04440 AC024595.1-201ENST00000623088 387 ntBASIC3.11□□□□□ -1.91
HLA-DPB1P04440 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.11□□□□□ -1.91
HLA-DPB1P04440 AC009452.1-201ENST00000640823 606 ntBASIC3.11□□□□□ -1.91
HLA-DPB1P04440 AC106871.1-201ENST00000568324 3102 ntBASIC3.11□□□□□ -1.91
HLA-DPB1P04440 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.11□□□□□ -1.91
HLA-DPB1P04440 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DPB1P04440 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
HLA-DPB1P04440 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DPB1P04440 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DPB1P04440 MFSD8-233ENST00000641482 4860 ntBASIC3.1□□□□□ -1.91
HLA-DPB1P04440 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DPB1P04440 RNA5SP124-201ENST00000362739 110 ntBASIC3.1□□□□□ -1.91
HLA-DPB1P04440 RN7SKP44-201ENST00000363602 316 ntBASIC3.1□□□□□ -1.91
HLA-DPB1P04440 U3.11-201ENST00000364476 212 ntBASIC3.1□□□□□ -1.91
HLA-DPB1P04440 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.1□□□□□ -1.91
HLA-DPB1P04440 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.1□□□□□ -1.91
HLA-DPB1P04440 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
HLA-DPB1P04440 ATP5F1P6-201ENST00000402768 767 ntBASIC3.1□□□□□ -1.91
HLA-DPB1P04440 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.1□□□□□ -1.91
HLA-DPB1P04440 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
HLA-DPB1P04440 AC092745.2-202ENST00000411880 369 ntBASIC3.1□□□□□ -1.91
HLA-DPB1P04440 HMGB3P23-201ENST00000414981 585 ntBASIC3.1□□□□□ -1.91
HLA-DPB1P04440 AIMP1P1-201ENST00000418670 937 ntBASIC3.1□□□□□ -1.91
HLA-DPB1P04440 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DPB1P04440 RPL37P1-201ENST00000432310 284 ntBASIC3.1□□□□□ -1.91
HLA-DPB1P04440 AL035246.1-201ENST00000433554 1255 ntBASIC3.1□□□□□ -1.91
HLA-DPB1P04440 FTH1P1-201ENST00000437933 532 ntBASIC3.1□□□□□ -1.91
HLA-DPB1P04440 AC122718.1-201ENST00000439448 744 ntBASIC3.1□□□□□ -1.91
HLA-DPB1P04440 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.1□□□□□ -1.91
HLA-DPB1P04440 AL359073.1-201ENST00000448036 403 ntBASIC3.1□□□□□ -1.91
HLA-DPB1P04440 DNAJC19P8-201ENST00000452887 259 ntBASIC3.1□□□□□ -1.91
HLA-DPB1P04440 AL645939.1-201ENST00000453429 797 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms