Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC244505.3-201ENST00000454598 187 ntBASIC4.04□□□□□ -1.76
VTNP04004 RPL6P9-201ENST00000466502 859 ntBASIC4.04□□□□□ -1.76
VTNP04004 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.04□□□□□ -1.76
VTNP04004 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.04□□□□□ -1.76
VTNP04004 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.04□□□□□ -1.76
VTNP04004 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.04□□□□□ -1.76
VTNP04004 SNORD116-26-201ENST00000516006 96 ntBASIC4.04□□□□□ -1.76
VTNP04004 SNORA70.18-201ENST00000516696 98 ntBASIC4.04□□□□□ -1.76
VTNP04004 SUMO2P20-201ENST00000520803 283 ntBASIC4.04□□□□□ -1.76
VTNP04004 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.04□□□□□ -1.76
VTNP04004 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.04□□□□□ -1.76
VTNP04004 AL132857.1-201ENST00000555180 708 ntBASIC4.04□□□□□ -1.76
VTNP04004 AL158211.1-201ENST00000566763 763 ntBASIC4.04□□□□□ -1.76
VTNP04004 MIR4512-201ENST00000583257 77 ntBASIC4.04□□□□□ -1.76
VTNP04004 NF1P5-201ENST00000588287 448 ntBASIC4.04□□□□□ -1.76
VTNP04004 AL390816.3-201ENST00000604527 1066 ntBASIC4.04□□□□□ -1.76
VTNP04004 AC009948.4-201ENST00000604692 675 ntBASIC4.04□□□□□ -1.76
VTNP04004 RNU4-5P-201ENST00000607255 135 ntBASIC4.04□□□□□ -1.76
VTNP04004 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.04□□□□□ -1.76
VTNP04004 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.04□□□□□ -1.76
VTNP04004 AL392088.2-201ENST00000637607 285 ntBASIC4.04□□□□□ -1.76
VTNP04004 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.04□□□□□ -1.76
VTNP04004 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.04□□□□□ -1.76
VTNP04004 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.04□□□□□ -1.76
VTNP04004 LINC00561-201ENST00000565815 2738 ntBASIC4.04□□□□□ -1.76
VTNP04004 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.04□□□□□ -1.76
VTNP04004 AC022031.1-201ENST00000585985 2593 ntBASIC4.04□□□□□ -1.76
VTNP04004 AC134882.1-201ENST00000603738 1676 ntBASIC4.03□□□□□ -1.76
VTNP04004 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VTNP04004 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VTNP04004 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.03□□□□□ -1.76
VTNP04004 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VTNP04004 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.03□□□□□ -1.76
VTNP04004 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
VTNP04004 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.03□□□□□ -1.76
VTNP04004 OR52E6-202ENST00000379946 954 ntBASIC4.03□□□□□ -1.76
VTNP04004 RNU6-224P-201ENST00000384055 107 ntBASIC4.03□□□□□ -1.76
VTNP04004 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VTNP04004 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VTNP04004 HLFP1-201ENST00000402375 499 ntBASIC4.03□□□□□ -1.76
VTNP04004 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.03□□□□□ -1.76
VTNP04004 AC073136.2-201ENST00000417282 849 ntBASIC4.03□□□□□ -1.76
VTNP04004 AC234782.4-201ENST00000417646 1048 ntBASIC4.03□□□□□ -1.76
VTNP04004 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
VTNP04004 OR5AW1P-201ENST00000426334 1006 ntBASIC4.03□□□□□ -1.76
VTNP04004 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.03□□□□□ -1.76
VTNP04004 HIGD1AP12-201ENST00000427832 281 ntBASIC4.03□□□□□ -1.76
VTNP04004 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.03□□□□□ -1.76
VTNP04004 GTF2IP3-201ENST00000433887 494 ntBASIC4.03□□□□□ -1.76
VTNP04004 AC073063.1-201ENST00000434352 607 ntBASIC4.03□□□□□ -1.76
VTNP04004 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.03□□□□□ -1.76
VTNP04004 RPL21P23-201ENST00000446654 460 ntBASIC4.03□□□□□ -1.76
VTNP04004 AL050341.1-201ENST00000447743 313 ntBASIC4.03□□□□□ -1.76
VTNP04004 PPIAP3-201ENST00000450588 505 ntBASIC4.03□□□□□ -1.76
VTNP04004 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.03□□□□□ -1.76
VTNP04004 AC073387.1-201ENST00000453261 709 ntBASIC4.03□□□□□ -1.76
VTNP04004 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.03□□□□□ -1.76
VTNP04004 AL035404.1-201ENST00000497982 568 ntBASIC4.03□□□□□ -1.76
VTNP04004 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.03□□□□□ -1.76
VTNP04004 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.03□□□□□ -1.76
VTNP04004 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.03□□□□□ -1.76
VTNP04004 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.03□□□□□ -1.76
VTNP04004 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.03□□□□□ -1.76
VTNP04004 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.03□□□□□ -1.76
VTNP04004 AC020914.6-201ENST00000594327 272 ntBASIC4.03□□□□□ -1.76
VTNP04004 AL445435.1-201ENST00000604232 665 ntBASIC4.03□□□□□ -1.76
VTNP04004 AL163642.2-201ENST00000604722 1019 ntBASIC4.03□□□□□ -1.76
VTNP04004 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.03□□□□□ -1.76
VTNP04004 AC092354.2-201ENST00000607786 514 ntBASIC4.03□□□□□ -1.76
VTNP04004 AC243312.2-201ENST00000623340 601 ntBASIC4.03□□□□□ -1.76
VTNP04004 AC104985.3-201ENST00000623479 597 ntBASIC4.03□□□□□ -1.76
VTNP04004 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
VTNP04004 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VTNP04004 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VTNP04004 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.03□□□□□ -1.76
VTNP04004 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.03□□□□□ -1.76
VTNP04004 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
VTNP04004 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
VTNP04004 AC104446.1-201ENST00000613728 1321 ntBASIC4.02□□□□□ -1.77
VTNP04004 SNORD74.4-201ENST00000364129 80 ntBASIC4.02□□□□□ -1.77
VTNP04004 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
VTNP04004 RNU6-761P-201ENST00000384148 107 ntBASIC4.02□□□□□ -1.77
VTNP04004 MIR490-201ENST00000384865 128 ntBASIC4.02□□□□□ -1.77
VTNP04004 ANAPC10P1-201ENST00000395991 556 ntBASIC4.02□□□□□ -1.77
VTNP04004 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
VTNP04004 SNORA11.1-201ENST00000408133 129 ntBASIC4.02□□□□□ -1.77
VTNP04004 RNA5SP104-201ENST00000410989 118 ntBASIC4.02□□□□□ -1.77
VTNP04004 RNA5SP39-201ENST00000411245 120 ntBASIC4.02□□□□□ -1.77
VTNP04004 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.02□□□□□ -1.77
VTNP04004 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.02□□□□□ -1.77
VTNP04004 AC114814.2-201ENST00000419195 485 ntBASIC4.02□□□□□ -1.77
VTNP04004 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.02□□□□□ -1.77
VTNP04004 RPL7P4-203ENST00000430239 730 ntBASIC4.02□□□□□ -1.77
VTNP04004 MTCYBP15-201ENST00000433123 1127 ntBASIC4.02□□□□□ -1.77
VTNP04004 AC234064.1-201ENST00000436312 247 ntBASIC4.02□□□□□ -1.77
VTNP04004 AL353748.1-201ENST00000440753 474 ntBASIC4.02□□□□□ -1.77
VTNP04004 AL929288.2-201ENST00000446368 407 ntBASIC4.02□□□□□ -1.77
VTNP04004 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.02□□□□□ -1.77
VTNP04004 HMGB3P21-201ENST00000452483 547 ntBASIC4.02□□□□□ -1.77
VTNP04004 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms