Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
COL1A1P02452 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
COL1A1P02452 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
COL1A1P02452 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
COL1A1P02452 SNORA68.2-201ENST00000391263 128 ntBASIC3.63□□□□□ -1.83
COL1A1P02452 RPL23AP22-201ENST00000437556 453 ntBASIC3.63□□□□□ -1.83
COL1A1P02452 AC112653.1-201ENST00000443851 386 ntBASIC3.63□□□□□ -1.83
COL1A1P02452 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.63□□□□□ -1.83
COL1A1P02452 CYCSP20-201ENST00000473154 315 ntBASIC3.63□□□□□ -1.83
COL1A1P02452 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.63□□□□□ -1.83
COL1A1P02452 RN7SKP132-201ENST00000516001 208 ntBASIC3.63□□□□□ -1.83
COL1A1P02452 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
COL1A1P02452 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.63□□□□□ -1.83
COL1A1P02452 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.63□□□□□ -1.83
COL1A1P02452 CYCSP39-201ENST00000565821 309 ntBASIC3.63□□□□□ -1.83
COL1A1P02452 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.63□□□□□ -1.83
COL1A1P02452 AC015871.2-201ENST00000603605 948 ntBASIC3.63□□□□□ -1.83
COL1A1P02452 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.63□□□□□ -1.83
COL1A1P02452 AL049555.1-201ENST00000562834 1933 ntBASIC3.63□□□□□ -1.83
COL1A1P02452 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.63□□□□□ -1.83
COL1A1P02452 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
COL1A1P02452 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.63□□□□□ -1.83
COL1A1P02452 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
COL1A1P02452 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.62□□□□□ -1.83
COL1A1P02452 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
COL1A1P02452 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
COL1A1P02452 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC3.62□□□□□ -1.83
COL1A1P02452 RNU6-851P-201ENST00000384565 107 ntBASIC3.62□□□□□ -1.83
COL1A1P02452 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.62□□□□□ -1.83
COL1A1P02452 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.62□□□□□ -1.83
COL1A1P02452 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.62□□□□□ -1.83
COL1A1P02452 AL121890.1-201ENST00000435457 205 ntBASIC3.62□□□□□ -1.83
COL1A1P02452 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.62□□□□□ -1.83
COL1A1P02452 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.62□□□□□ -1.83
COL1A1P02452 FABP5P12-201ENST00000515543 389 ntBASIC3.62□□□□□ -1.83
COL1A1P02452 COX6B1P6-201ENST00000522347 255 ntBASIC3.62□□□□□ -1.83
COL1A1P02452 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC3.62□□□□□ -1.83
COL1A1P02452 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.62□□□□□ -1.83
COL1A1P02452 TUG1_1.1-201ENST00000610654 145 ntBASIC3.62□□□□□ -1.83
COL1A1P02452 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
COL1A1P02452 AC093908.1-201ENST00000623125 8092 ntBASIC3.62□□□□□ -1.83
COL1A1P02452 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.61□□□□□ -1.83
COL1A1P02452 OR56A5-201ENST00000340110 738 ntBASIC3.61□□□□□ -1.83
COL1A1P02452 SNORD56.3-201ENST00000363507 71 ntBASIC3.61□□□□□ -1.83
COL1A1P02452 RNA5SP293-201ENST00000410527 113 ntBASIC3.61□□□□□ -1.83
COL1A1P02452 AL034379.1-201ENST00000423216 253 ntBASIC3.61□□□□□ -1.83
COL1A1P02452 FAR1P1-201ENST00000427163 934 ntBASIC3.61□□□□□ -1.83
COL1A1P02452 AL450263.2-201ENST00000439400 589 ntBASIC3.61□□□□□ -1.83
COL1A1P02452 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.61□□□□□ -1.83
COL1A1P02452 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.61□□□□□ -1.83
COL1A1P02452 HMGN2P7-201ENST00000456186 273 ntBASIC3.61□□□□□ -1.83
COL1A1P02452 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.61□□□□□ -1.83
COL1A1P02452 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.61□□□□□ -1.83
COL1A1P02452 SETP12-201ENST00000514068 805 ntBASIC3.61□□□□□ -1.83
COL1A1P02452 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
COL1A1P02452 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.61□□□□□ -1.83
COL1A1P02452 AL136360.1-201ENST00000503377 1900 ntBASIC3.61□□□□□ -1.83
COL1A1P02452 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL1A1P02452 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL1A1P02452 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.61□□□□□ -1.83
COL1A1P02452 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.61□□□□□ -1.83
COL1A1P02452 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.61□□□□□ -1.83
COL1A1P02452 MTND5P23-201ENST00000430812 1655 ntBASIC3.61□□□□□ -1.83
COL1A1P02452 RPL23AP48-201ENST00000406913 488 ntBASIC3.6□□□□□ -1.83
COL1A1P02452 PTP4A1P1-201ENST00000420539 515 ntBASIC3.6□□□□□ -1.83
COL1A1P02452 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.6□□□□□ -1.83
COL1A1P02452 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.6□□□□□ -1.83
COL1A1P02452 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COL1A1P02452 HIGD1AP13-201ENST00000509878 289 ntBASIC3.6□□□□□ -1.83
COL1A1P02452 snoU109.6-201ENST00000516831 118 ntBASIC3.6□□□□□ -1.83
COL1A1P02452 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.6□□□□□ -1.83
COL1A1P02452 OR5G4P-201ENST00000525251 760 ntBASIC3.6□□□□□ -1.83
COL1A1P02452 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.6□□□□□ -1.83
COL1A1P02452 AC079600.2-201ENST00000550076 130 ntBASIC3.6□□□□□ -1.83
COL1A1P02452 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.6□□□□□ -1.83
COL1A1P02452 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.6□□□□□ -1.83
COL1A1P02452 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.6□□□□□ -1.83
COL1A1P02452 AL008729.2-201ENST00000606393 473 ntBASIC3.6□□□□□ -1.83
COL1A1P02452 AL359535.1-201ENST00000612100 1087 ntBASIC3.6□□□□□ -1.83
COL1A1P02452 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL1A1P02452 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL1A1P02452 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL1A1P02452 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.6□□□□□ -1.83
COL1A1P02452 ELL2P4-201ENST00000446870 1376 ntBASIC3.6□□□□□ -1.83
COL1A1P02452 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.6□□□□□ -1.83
COL1A1P02452 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL1A1P02452 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
COL1A1P02452 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COL1A1P02452 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
COL1A1P02452 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
COL1A1P02452 AL592148.1-201ENST00000413568 445 ntBASIC3.6□□□□□ -1.83
COL1A1P02452 AL445528.1-201ENST00000426330 420 ntBASIC3.6□□□□□ -1.83
COL1A1P02452 AC073069.1-201ENST00000428657 441 ntBASIC3.6□□□□□ -1.83
COL1A1P02452 ZYG11AP1-201ENST00000430329 837 ntBASIC3.6□□□□□ -1.83
COL1A1P02452 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.6□□□□□ -1.83
COL1A1P02452 AC114967.1-201ENST00000504890 259 ntBASIC3.6□□□□□ -1.83
COL1A1P02452 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC3.6□□□□□ -1.83
COL1A1P02452 RNA5SP217-201ENST00000515959 91 ntBASIC3.6□□□□□ -1.83
COL1A1P02452 AC103783.1-201ENST00000520506 373 ntBASIC3.6□□□□□ -1.83
COL1A1P02452 AC107016.2-201ENST00000547968 190 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms