Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC008837.2-201ENST00000513076 418 ntBASIC3.83□□□□□ -1.8
SNX3O60493 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.83□□□□□ -1.8
SNX3O60493 RN7SKP60-201ENST00000516985 239 ntBASIC3.83□□□□□ -1.8
SNX3O60493 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.83□□□□□ -1.8
SNX3O60493 AC008802.1-201ENST00000519121 791 ntBASIC3.83□□□□□ -1.8
SNX3O60493 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.83□□□□□ -1.8
SNX3O60493 ARL2BPP5-201ENST00000523141 481 ntBASIC3.83□□□□□ -1.8
SNX3O60493 AL139174.1-201ENST00000531489 886 ntBASIC3.83□□□□□ -1.8
SNX3O60493 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.83□□□□□ -1.8
SNX3O60493 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.83□□□□□ -1.8
SNX3O60493 MTCYBP27-201ENST00000555160 670 ntBASIC3.83□□□□□ -1.8
SNX3O60493 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.83□□□□□ -1.8
SNX3O60493 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.83□□□□□ -1.8
SNX3O60493 OR7E18P-201ENST00000592589 702 ntBASIC3.83□□□□□ -1.8
SNX3O60493 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.83□□□□□ -1.8
SNX3O60493 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC3.83□□□□□ -1.8
SNX3O60493 AC092954.1-201ENST00000609121 445 ntBASIC3.83□□□□□ -1.8
SNX3O60493 AC016769.4-201ENST00000616893 535 ntBASIC3.83□□□□□ -1.8
SNX3O60493 AL122126.1-201ENST00000546905 1318 ntBASIC3.83□□□□□ -1.8
SNX3O60493 RARSP1-201ENST00000542842 1418 ntBASIC3.83□□□□□ -1.8
SNX3O60493 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.83□□□□□ -1.8
SNX3O60493 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SNX3O60493 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SNX3O60493 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SNX3O60493 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
SNX3O60493 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SNX3O60493 AC022893.2-201ENST00000564832 3296 ntBASIC3.83□□□□□ -1.8
SNX3O60493 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
SNX3O60493 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
SNX3O60493 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SNX3O60493 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.82□□□□□ -1.8
SNX3O60493 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.82□□□□□ -1.8
SNX3O60493 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SNX3O60493 AC073073.2-201ENST00000609827 2578 ntBASIC3.82□□□□□ -1.8
SNX3O60493 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
SNX3O60493 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.82□□□□□ -1.8
SNX3O60493 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
SNX3O60493 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SNX3O60493 AC095050.2-201ENST00000510748 1458 ntBASIC3.82□□□□□ -1.8
SNX3O60493 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SNX3O60493 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SNX3O60493 AC109315.1-201ENST00000584143 1347 ntBASIC3.82□□□□□ -1.8
SNX3O60493 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SNX3O60493 Y_RNA.408-201ENST00000383987 102 ntBASIC3.82□□□□□ -1.8
SNX3O60493 MIR513B-201ENST00000385136 84 ntBASIC3.82□□□□□ -1.8
SNX3O60493 AL645927.1-201ENST00000396783 406 ntBASIC3.82□□□□□ -1.8
SNX3O60493 SPTLC1P2-201ENST00000407089 121 ntBASIC3.82□□□□□ -1.8
SNX3O60493 RNU2-42P-201ENST00000410697 113 ntBASIC3.82□□□□□ -1.8
SNX3O60493 SNORA57.3-201ENST00000411095 141 ntBASIC3.82□□□□□ -1.8
SNX3O60493 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.82□□□□□ -1.8
SNX3O60493 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.82□□□□□ -1.8
SNX3O60493 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.82□□□□□ -1.8
SNX3O60493 CR769776.1-201ENST00000441254 787 ntBASIC3.82□□□□□ -1.8
SNX3O60493 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.82□□□□□ -1.8
SNX3O60493 PTENP1-201ENST00000447117 1215 ntBASIC3.82□□□□□ -1.8
SNX3O60493 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.82□□□□□ -1.8
SNX3O60493 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.82□□□□□ -1.8
SNX3O60493 RPL23AP14-201ENST00000468281 468 ntBASIC3.82□□□□□ -1.8
SNX3O60493 RN7SL177P-201ENST00000476596 299 ntBASIC3.82□□□□□ -1.8
SNX3O60493 AC083982.1-201ENST00000485679 344 ntBASIC3.82□□□□□ -1.8
SNX3O60493 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.82□□□□□ -1.8
SNX3O60493 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.82□□□□□ -1.8
SNX3O60493 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.82□□□□□ -1.8
SNX3O60493 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.82□□□□□ -1.8
SNX3O60493 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.82□□□□□ -1.8
SNX3O60493 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SNX3O60493 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.82□□□□□ -1.8
SNX3O60493 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.82□□□□□ -1.8
SNX3O60493 AC099522.1-202ENST00000514718 367 ntBASIC3.82□□□□□ -1.8
SNX3O60493 AC104057.1-201ENST00000515547 497 ntBASIC3.82□□□□□ -1.8
SNX3O60493 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.82□□□□□ -1.8
SNX3O60493 AP001189.2-201ENST00000527320 189 ntBASIC3.82□□□□□ -1.8
SNX3O60493 OR5AP1P-201ENST00000529730 940 ntBASIC3.82□□□□□ -1.8
SNX3O60493 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SNX3O60493 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.82□□□□□ -1.8
SNX3O60493 AC138915.2-201ENST00000569776 97 ntBASIC3.82□□□□□ -1.8
SNX3O60493 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.82□□□□□ -1.8
SNX3O60493 RN7SL753P-201ENST00000581238 290 ntBASIC3.82□□□□□ -1.8
SNX3O60493 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.82□□□□□ -1.8
SNX3O60493 AC006116.5-201ENST00000591936 559 ntBASIC3.82□□□□□ -1.8
SNX3O60493 AL161729.3-201ENST00000603533 673 ntBASIC3.82□□□□□ -1.8
SNX3O60493 AL137849.1-201ENST00000604767 169 ntBASIC3.82□□□□□ -1.8
SNX3O60493 AC005084.1-201ENST00000605160 304 ntBASIC3.82□□□□□ -1.8
SNX3O60493 AL445222.1-201ENST00000607259 628 ntBASIC3.82□□□□□ -1.8
SNX3O60493 AP000894.4-201ENST00000610185 483 ntBASIC3.82□□□□□ -1.8
SNX3O60493 AC013470.4-201ENST00000619978 986 ntBASIC3.82□□□□□ -1.8
SNX3O60493 AC022509.4-201ENST00000621404 572 ntBASIC3.82□□□□□ -1.8
SNX3O60493 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
SNX3O60493 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
SNX3O60493 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SNX3O60493 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNX3O60493 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNX3O60493 AC007390.2-201ENST00000606229 3803 ntBASIC3.81□□□□□ -1.8
SNX3O60493 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.81□□□□□ -1.8
SNX3O60493 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNX3O60493 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SNX3O60493 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNX3O60493 RNU5D-1-201ENST00000363299 116 ntBASIC3.81□□□□□ -1.8
SNX3O60493 SNORA70E-201ENST00000384492 135 ntBASIC3.81□□□□□ -1.8
SNX3O60493 MIR153-1-201ENST00000384914 90 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms