Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AC103710.4-201ENST00000609301 899 ntBASIC6.06□□□□□ -1.44
GRIN3BO60391 AC007497.1-201ENST00000610421 561 ntBASIC6.06□□□□□ -1.44
GRIN3BO60391 FAM27B-201ENST00000610601 213 ntBASIC6.06□□□□□ -1.44
GRIN3BO60391 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC6.06□□□□□ -1.44
GRIN3BO60391 AC104010.1-201ENST00000616889 150 ntBASIC6.06□□□□□ -1.44
GRIN3BO60391 AC002553.4-201ENST00000616896 331 ntBASIC6.06□□□□□ -1.44
GRIN3BO60391 AL359880.1-201ENST00000621879 266 ntBASIC6.06□□□□□ -1.44
GRIN3BO60391 AC116563.2-201ENST00000624751 535 ntBASIC6.06□□□□□ -1.44
GRIN3BO60391 AC112200.1-201ENST00000625015 234 ntBASIC6.06□□□□□ -1.44
GRIN3BO60391 AC005618.4-201ENST00000625053 554 ntBASIC6.06□□□□□ -1.44
GRIN3BO60391 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC6.06□□□□□ -1.44
GRIN3BO60391 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GRIN3BO60391 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
GRIN3BO60391 AC006378.2-201ENST00000623178 2476 ntBASIC6.06□□□□□ -1.44
GRIN3BO60391 AP005432.1-201ENST00000580891 3485 ntBASIC6.06□□□□□ -1.44
GRIN3BO60391 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GRIN3BO60391 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
GRIN3BO60391 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GRIN3BO60391 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GRIN3BO60391 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GRIN3BO60391 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
GRIN3BO60391 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
GRIN3BO60391 MTCO1P7-201ENST00000419523 1542 ntBASIC6.05□□□□□ -1.44
GRIN3BO60391 AC016745.2-201ENST00000608834 3443 ntBASIC6.05□□□□□ -1.44
GRIN3BO60391 SAMMSON-210ENST00000641260 1308 ntBASIC6.05□□□□□ -1.44
GRIN3BO60391 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
GRIN3BO60391 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GRIN3BO60391 Y_RNA.296-201ENST00000364930 108 ntBASIC6.05□□□□□ -1.44
GRIN3BO60391 MTCO3P40-201ENST00000392516 676 ntBASIC6.05□□□□□ -1.44
GRIN3BO60391 RPL7P58-201ENST00000402913 758 ntBASIC6.05□□□□□ -1.44
GRIN3BO60391 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC6.05□□□□□ -1.44
GRIN3BO60391 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC6.05□□□□□ -1.44
GRIN3BO60391 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC6.05□□□□□ -1.44
GRIN3BO60391 OR4C10P-201ENST00000434991 931 ntBASIC6.05□□□□□ -1.44
GRIN3BO60391 RPS26P40-201ENST00000435209 294 ntBASIC6.05□□□□□ -1.44
GRIN3BO60391 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC6.05□□□□□ -1.44
GRIN3BO60391 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC6.05□□□□□ -1.44
GRIN3BO60391 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC6.05□□□□□ -1.44
GRIN3BO60391 REG1CP-206ENST00000447469 496 ntBASIC6.05□□□□□ -1.44
GRIN3BO60391 AL133244.1-201ENST00000456007 258 ntBASIC6.05□□□□□ -1.44
GRIN3BO60391 FPGT-203ENST00000467578 601 ntTSL 2 BASIC6.05□□□□□ -1.44
GRIN3BO60391 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC6.05□□□□□ -1.44
GRIN3BO60391 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC6.05□□□□□ -1.44
GRIN3BO60391 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC6.05□□□□□ -1.44
GRIN3BO60391 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC6.05□□□□□ -1.44
GRIN3BO60391 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC6.05□□□□□ -1.44
GRIN3BO60391 CFL2-206ENST00000556161 546 ntTSL 4 BASIC6.05□□□□□ -1.44
GRIN3BO60391 AC017100.2-201ENST00000584628 355 ntBASIC6.05□□□□□ -1.44
GRIN3BO60391 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC6.05□□□□□ -1.44
GRIN3BO60391 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC6.05□□□□□ -1.44
GRIN3BO60391 BNIP3P23-201ENST00000599655 511 ntBASIC6.05□□□□□ -1.44
GRIN3BO60391 AP000907.4-201ENST00000604143 237 ntBASIC6.05□□□□□ -1.44
GRIN3BO60391 AC008945.2-201ENST00000606056 604 ntBASIC6.05□□□□□ -1.44
GRIN3BO60391 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.05□□□□□ -1.44
GRIN3BO60391 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC6.05□□□□□ -1.44
GRIN3BO60391 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC6.05□□□□□ -1.44
GRIN3BO60391 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
GRIN3BO60391 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GRIN3BO60391 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GRIN3BO60391 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GRIN3BO60391 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GRIN3BO60391 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GRIN3BO60391 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
GRIN3BO60391 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC6.05□□□□□ -1.44
GRIN3BO60391 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
GRIN3BO60391 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
GRIN3BO60391 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
GRIN3BO60391 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.04□□□□□ -1.44
GRIN3BO60391 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
GRIN3BO60391 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
GRIN3BO60391 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.04□□□□□ -1.44
GRIN3BO60391 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
GRIN3BO60391 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
GRIN3BO60391 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
GRIN3BO60391 Y_RNA.70-201ENST00000362886 110 ntBASIC6.04□□□□□ -1.44
GRIN3BO60391 GSTA9P-201ENST00000406231 611 ntBASIC6.04□□□□□ -1.44
GRIN3BO60391 CCNG1P1-201ENST00000406783 885 ntBASIC6.04□□□□□ -1.44
GRIN3BO60391 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
GRIN3BO60391 RN7SKP266-201ENST00000410232 287 ntBASIC6.04□□□□□ -1.44
GRIN3BO60391 RNU2-28P-201ENST00000410457 189 ntBASIC6.04□□□□□ -1.44
GRIN3BO60391 AC234782.4-201ENST00000417646 1048 ntBASIC6.04□□□□□ -1.44
GRIN3BO60391 RPL7P30-201ENST00000420888 709 ntBASIC6.04□□□□□ -1.44
GRIN3BO60391 AL513174.1-201ENST00000423182 629 ntBASIC6.04□□□□□ -1.44
GRIN3BO60391 FABP7P1-201ENST00000424004 391 ntBASIC6.04□□□□□ -1.44
GRIN3BO60391 AC012498.1-201ENST00000424037 437 ntBASIC6.04□□□□□ -1.44
GRIN3BO60391 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.04□□□□□ -1.44
GRIN3BO60391 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC6.04□□□□□ -1.44
GRIN3BO60391 SNRPEP7-201ENST00000438350 220 ntBASIC6.04□□□□□ -1.44
GRIN3BO60391 FHP1-201ENST00000442741 703 ntBASIC6.04□□□□□ -1.44
GRIN3BO60391 HSFY6P-201ENST00000445573 403 ntBASIC6.04□□□□□ -1.44
GRIN3BO60391 MTCO1P27-201ENST00000448269 226 ntBASIC6.04□□□□□ -1.44
GRIN3BO60391 AL118496.2-201ENST00000448300 230 ntBASIC6.04□□□□□ -1.44
GRIN3BO60391 RPS15AP1-201ENST00000457423 391 ntBASIC6.04□□□□□ -1.44
GRIN3BO60391 RN7SL542P-201ENST00000467147 294 ntBASIC6.04□□□□□ -1.44
GRIN3BO60391 ACTR3P3-201ENST00000480448 893 ntBASIC6.04□□□□□ -1.44
GRIN3BO60391 AC106872.3-201ENST00000495104 446 ntBASIC6.04□□□□□ -1.44
GRIN3BO60391 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.04□□□□□ -1.44
GRIN3BO60391 AC019235.1-201ENST00000503847 207 ntBASIC6.04□□□□□ -1.44
GRIN3BO60391 AC114981.1-201ENST00000503897 678 ntBASIC6.04□□□□□ -1.44
GRIN3BO60391 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms