Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC091179.1-201ENST00000461606 579 ntBASIC3.51□□□□□ -1.85
LSM1O15116 AC087312.1-201ENST00000471411 480 ntBASIC3.51□□□□□ -1.85
LSM1O15116 GAPDHP36-201ENST00000480688 918 ntBASIC3.51□□□□□ -1.85
LSM1O15116 RPS4XP13-201ENST00000483219 789 ntBASIC3.51□□□□□ -1.85
LSM1O15116 HMGB3P14-201ENST00000494195 599 ntBASIC3.51□□□□□ -1.85
LSM1O15116 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LSM1O15116 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.51□□□□□ -1.85
LSM1O15116 AC006518.1-201ENST00000541449 943 ntBASIC3.51□□□□□ -1.85
LSM1O15116 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.51□□□□□ -1.85
LSM1O15116 SYF2P1-201ENST00000550658 413 ntBASIC3.51□□□□□ -1.85
LSM1O15116 AC023161.2-201ENST00000551218 780 ntBASIC3.51□□□□□ -1.85
LSM1O15116 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.51□□□□□ -1.85
LSM1O15116 AC025918.2-201ENST00000558683 763 ntBASIC3.51□□□□□ -1.85
LSM1O15116 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.51□□□□□ -1.85
LSM1O15116 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.51□□□□□ -1.85
LSM1O15116 AC233266.2-201ENST00000567067 528 ntBASIC3.51□□□□□ -1.85
LSM1O15116 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.51□□□□□ -1.85
LSM1O15116 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.51□□□□□ -1.85
LSM1O15116 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.51□□□□□ -1.85
LSM1O15116 YWHAQP7-201ENST00000603536 658 ntBASIC3.51□□□□□ -1.85
LSM1O15116 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
LSM1O15116 AL356490.1-201ENST00000623079 479 ntBASIC3.51□□□□□ -1.85
LSM1O15116 AL732618.1-201ENST00000623251 301 ntBASIC3.51□□□□□ -1.85
LSM1O15116 AC092184.1-201ENST00000625042 715 ntBASIC3.51□□□□□ -1.85
LSM1O15116 AC058791.1-201ENST00000608412 3198 ntBASIC3.51□□□□□ -1.85
LSM1O15116 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.5□□□□□ -1.85
LSM1O15116 PABPC1P7-201ENST00000413177 1513 ntBASIC3.5□□□□□ -1.85
LSM1O15116 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LSM1O15116 AC007656.2-201ENST00000624902 4547 ntBASIC3.5□□□□□ -1.85
LSM1O15116 RNA5SP283-201ENST00000365604 119 ntBASIC3.5□□□□□ -1.85
LSM1O15116 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LSM1O15116 DYNLT3P1-201ENST00000378574 347 ntBASIC3.5□□□□□ -1.85
LSM1O15116 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
LSM1O15116 AL049693.1-201ENST00000402760 611 ntBASIC3.5□□□□□ -1.85
LSM1O15116 CRYBB2P1-203ENST00000415709 538 ntBASIC3.5□□□□□ -1.85
LSM1O15116 EI24P1-201ENST00000416584 867 ntBASIC3.5□□□□□ -1.85
LSM1O15116 AC073310.1-201ENST00000423226 1033 ntBASIC3.5□□□□□ -1.85
LSM1O15116 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.5□□□□□ -1.85
LSM1O15116 OSTCP5-201ENST00000425293 453 ntBASIC3.5□□□□□ -1.85
LSM1O15116 DPPA2P1-201ENST00000428060 556 ntBASIC3.5□□□□□ -1.85
LSM1O15116 AL590103.1-201ENST00000434488 307 ntBASIC3.5□□□□□ -1.85
LSM1O15116 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.5□□□□□ -1.85
LSM1O15116 AC007000.2-201ENST00000442564 487 ntBASIC3.5□□□□□ -1.85
LSM1O15116 AC089999.1-201ENST00000460336 374 ntBASIC3.5□□□□□ -1.85
LSM1O15116 RPS4XP22-201ENST00000480755 780 ntBASIC3.5□□□□□ -1.85
LSM1O15116 RPL23AP55-201ENST00000498163 452 ntBASIC3.5□□□□□ -1.85
LSM1O15116 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.5□□□□□ -1.85
LSM1O15116 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.5□□□□□ -1.85
LSM1O15116 AC010460.1-201ENST00000507087 466 ntBASIC3.5□□□□□ -1.85
LSM1O15116 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.5□□□□□ -1.85
LSM1O15116 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.5□□□□□ -1.85
LSM1O15116 PCBP2P3-201ENST00000509726 843 ntBASIC3.5□□□□□ -1.85
LSM1O15116 RN7SKP244-201ENST00000516513 307 ntBASIC3.5□□□□□ -1.85
LSM1O15116 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.5□□□□□ -1.85
LSM1O15116 AP006245.1-201ENST00000522549 120 ntBASIC3.5□□□□□ -1.85
LSM1O15116 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.5□□□□□ -1.85
LSM1O15116 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.5□□□□□ -1.85
LSM1O15116 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.5□□□□□ -1.85
LSM1O15116 AC010735.1-201ENST00000567305 1026 ntBASIC3.5□□□□□ -1.85
LSM1O15116 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LSM1O15116 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.5□□□□□ -1.85
LSM1O15116 AC008687.2-201ENST00000597865 520 ntBASIC3.5□□□□□ -1.85
LSM1O15116 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC3.5□□□□□ -1.85
LSM1O15116 AL590392.1-201ENST00000604960 446 ntBASIC3.5□□□□□ -1.85
LSM1O15116 MIR6748-201ENST00000610433 71 ntBASIC3.5□□□□□ -1.85
LSM1O15116 AC024595.1-201ENST00000623088 387 ntBASIC3.5□□□□□ -1.85
LSM1O15116 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.5□□□□□ -1.85
LSM1O15116 FRG1DP-201ENST00000635586 771 ntBASIC3.5□□□□□ -1.85
LSM1O15116 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
LSM1O15116 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
LSM1O15116 MTND5P28-201ENST00000438005 1594 ntBASIC3.5□□□□□ -1.85
LSM1O15116 AL359893.1-201ENST00000447628 1580 ntBASIC3.5□□□□□ -1.85
LSM1O15116 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LSM1O15116 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
LSM1O15116 AC107081.3-201ENST00000612715 2034 ntBASIC3.49□□□□□ -1.85
LSM1O15116 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LSM1O15116 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.49□□□□□ -1.85
LSM1O15116 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
LSM1O15116 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LSM1O15116 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LSM1O15116 OR5T3-201ENST00000303059 1023 ntBASIC3.49□□□□□ -1.85
LSM1O15116 AC068538.1-201ENST00000376856 336 ntBASIC3.49□□□□□ -1.85
LSM1O15116 MIR30B-201ENST00000384850 88 ntBASIC3.49□□□□□ -1.85
LSM1O15116 MIR141-201ENST00000384975 95 ntBASIC3.49□□□□□ -1.85
LSM1O15116 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
LSM1O15116 AL136116.1-201ENST00000403591 381 ntBASIC3.49□□□□□ -1.85
LSM1O15116 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.49□□□□□ -1.85
LSM1O15116 COX6CP17-201ENST00000421389 185 ntBASIC3.49□□□□□ -1.85
LSM1O15116 AL139247.1-201ENST00000422768 325 ntBASIC3.49□□□□□ -1.85
LSM1O15116 SDCBPP2-201ENST00000424643 885 ntBASIC3.49□□□□□ -1.85
LSM1O15116 AL353705.1-201ENST00000433468 480 ntBASIC3.49□□□□□ -1.85
LSM1O15116 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.49□□□□□ -1.85
LSM1O15116 AC009220.1-201ENST00000451614 275 ntBASIC3.49□□□□□ -1.85
LSM1O15116 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.49□□□□□ -1.85
LSM1O15116 AC084357.1-201ENST00000473404 255 ntBASIC3.49□□□□□ -1.85
LSM1O15116 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LSM1O15116 ACTG1P13-201ENST00000486987 1043 ntBASIC3.49□□□□□ -1.85
LSM1O15116 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LSM1O15116 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.49□□□□□ -1.85
LSM1O15116 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms