Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
TRIM38O00635 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM38O00635 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM38O00635 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.75□□□□□ -1.65
TRIM38O00635 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM38O00635 AC009643.1-201ENST00000532030 391 ntBASIC4.75□□□□□ -1.65
TRIM38O00635 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.75□□□□□ -1.65
TRIM38O00635 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM38O00635 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.75□□□□□ -1.65
TRIM38O00635 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM38O00635 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM38O00635 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.75□□□□□ -1.65
TRIM38O00635 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.75□□□□□ -1.65
TRIM38O00635 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.75□□□□□ -1.65
TRIM38O00635 MIR4715-201ENST00000584117 79 ntBASIC4.75□□□□□ -1.65
TRIM38O00635 AC091135.1-201ENST00000585943 307 ntBASIC4.75□□□□□ -1.65
TRIM38O00635 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM38O00635 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM38O00635 AL356055.1-201ENST00000602528 446 ntBASIC4.75□□□□□ -1.65
TRIM38O00635 AL031281.1-201ENST00000604049 488 ntBASIC4.75□□□□□ -1.65
TRIM38O00635 AC010738.1-201ENST00000604970 987 ntBASIC4.75□□□□□ -1.65
TRIM38O00635 AC124312.4-201ENST00000605533 310 ntBASIC4.75□□□□□ -1.65
TRIM38O00635 AC113194.1-201ENST00000606037 500 ntBASIC4.75□□□□□ -1.65
TRIM38O00635 AP001521.1-201ENST00000609150 300 ntBASIC4.75□□□□□ -1.65
TRIM38O00635 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
TRIM38O00635 AC018755.4-201ENST00000619715 454 ntBASIC4.75□□□□□ -1.65
TRIM38O00635 Z69908.1-201ENST00000622603 247 ntBASIC4.75□□□□□ -1.65
TRIM38O00635 AC099654.10-201ENST00000640395 161 ntBASIC4.75□□□□□ -1.65
TRIM38O00635 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM38O00635 KARSP3-201ENST00000571212 1504 ntBASIC4.75□□□□□ -1.65
TRIM38O00635 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.75□□□□□ -1.65
TRIM38O00635 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
TRIM38O00635 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM38O00635 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM38O00635 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM38O00635 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM38O00635 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM38O00635 AL592148.3-201ENST00000608771 2646 ntBASIC4.75□□□□□ -1.65
TRIM38O00635 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
TRIM38O00635 AC092435.4-201ENST00000623012 4159 ntBASIC4.74□□□□□ -1.65
TRIM38O00635 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM38O00635 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM38O00635 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
TRIM38O00635 OR4K15-201ENST00000305051 1216 ntBASIC4.74□□□□□ -1.65
TRIM38O00635 FAM3C2-201ENST00000312214 681 ntBASIC4.74□□□□□ -1.65
TRIM38O00635 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
TRIM38O00635 RNU6-1283P-201ENST00000365314 105 ntBASIC4.74□□□□□ -1.65
TRIM38O00635 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM38O00635 RNU6-1226P-201ENST00000384317 107 ntBASIC4.74□□□□□ -1.65
TRIM38O00635 SNORD96B-201ENST00000386148 79 ntBASIC4.74□□□□□ -1.65
TRIM38O00635 U3.22-201ENST00000391120 215 ntBASIC4.74□□□□□ -1.65
TRIM38O00635 SNORA11-201ENST00000408789 128 ntBASIC4.74□□□□□ -1.65
TRIM38O00635 RGS17P1-201ENST00000423358 553 ntBASIC4.74□□□□□ -1.65
TRIM38O00635 AC092162.1-201ENST00000432828 434 ntBASIC4.74□□□□□ -1.65
TRIM38O00635 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM38O00635 MTATP6P13-201ENST00000438531 667 ntBASIC4.74□□□□□ -1.65
TRIM38O00635 MTCYBP34-201ENST00000439552 670 ntBASIC4.74□□□□□ -1.65
TRIM38O00635 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM38O00635 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM38O00635 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM38O00635 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.74□□□□□ -1.65
TRIM38O00635 AL359385.1-201ENST00000456509 365 ntBASIC4.74□□□□□ -1.65
TRIM38O00635 RPS5P7-201ENST00000456664 608 ntBASIC4.74□□□□□ -1.65
TRIM38O00635 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM38O00635 AC022795.1-201ENST00000473808 480 ntBASIC4.74□□□□□ -1.65
TRIM38O00635 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM38O00635 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.74□□□□□ -1.65
TRIM38O00635 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM38O00635 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM38O00635 HMGB1P28-201ENST00000507778 552 ntBASIC4.74□□□□□ -1.65
TRIM38O00635 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.74□□□□□ -1.65
TRIM38O00635 AC021146.3-201ENST00000511911 260 ntBASIC4.74□□□□□ -1.65
TRIM38O00635 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM38O00635 AC016065.2-201ENST00000514530 444 ntBASIC4.74□□□□□ -1.65
TRIM38O00635 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM38O00635 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM38O00635 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM38O00635 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM38O00635 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.74□□□□□ -1.65
TRIM38O00635 AC090502.2-201ENST00000549267 280 ntBASIC4.74□□□□□ -1.65
TRIM38O00635 EEF1B2P4-201ENST00000551398 348 ntBASIC4.74□□□□□ -1.65
TRIM38O00635 AL133241.1-201ENST00000556832 487 ntBASIC4.74□□□□□ -1.65
TRIM38O00635 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.74□□□□□ -1.65
TRIM38O00635 AC112220.3-201ENST00000605502 502 ntBASIC4.74□□□□□ -1.65
TRIM38O00635 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM38O00635 AL049794.2-201ENST00000616301 365 ntBASIC4.74□□□□□ -1.65
TRIM38O00635 AL022401.1-201ENST00000619498 108 ntBASIC4.74□□□□□ -1.65
TRIM38O00635 AC099842.1-201ENST00000619919 596 ntBASIC4.74□□□□□ -1.65
TRIM38O00635 AC244258.1-201ENST00000637553 1071 ntBASIC4.74□□□□□ -1.65
TRIM38O00635 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM38O00635 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
TRIM38O00635 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
TRIM38O00635 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM38O00635 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
TRIM38O00635 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM38O00635 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM38O00635 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM38O00635 RNU6-1122P-201ENST00000384449 107 ntBASIC4.73□□□□□ -1.65
TRIM38O00635 ENSAP1-201ENST00000392855 326 ntBASIC4.73□□□□□ -1.65
TRIM38O00635 BTBD10P2-201ENST00000404779 676 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms