Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 OR4A15-201ENST00000314706 1035 ntBASIC3.71□□□□□ -1.82
SLC28A1O00337 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SLC28A1O00337 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SLC28A1O00337 RNA5SP443-201ENST00000363083 132 ntBASIC3.71□□□□□ -1.82
SLC28A1O00337 RNA5SP97-201ENST00000365006 84 ntBASIC3.71□□□□□ -1.82
SLC28A1O00337 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.71□□□□□ -1.82
SLC28A1O00337 Y_RNA.578-201ENST00000390903 88 ntBASIC3.71□□□□□ -1.82
SLC28A1O00337 RNU4-6P-201ENST00000410804 122 ntBASIC3.71□□□□□ -1.82
SLC28A1O00337 FCF1P2-201ENST00000415284 583 ntBASIC3.71□□□□□ -1.82
SLC28A1O00337 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.71□□□□□ -1.82
SLC28A1O00337 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.71□□□□□ -1.82
SLC28A1O00337 Z97055.1-201ENST00000419730 712 ntBASIC3.71□□□□□ -1.82
SLC28A1O00337 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.71□□□□□ -1.82
SLC28A1O00337 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.71□□□□□ -1.82
SLC28A1O00337 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.71□□□□□ -1.82
SLC28A1O00337 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.71□□□□□ -1.82
SLC28A1O00337 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.71□□□□□ -1.82
SLC28A1O00337 TBCAP1-201ENST00000436520 327 ntBASIC3.71□□□□□ -1.82
SLC28A1O00337 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.71□□□□□ -1.82
SLC28A1O00337 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SLC28A1O00337 AC084198.1-201ENST00000477747 402 ntBASIC3.71□□□□□ -1.82
SLC28A1O00337 PPIAP15-201ENST00000479662 484 ntBASIC3.71□□□□□ -1.82
SLC28A1O00337 AC078817.1-201ENST00000492623 435 ntBASIC3.71□□□□□ -1.82
SLC28A1O00337 DYNLL1P6-201ENST00000503440 264 ntBASIC3.71□□□□□ -1.82
SLC28A1O00337 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.71□□□□□ -1.82
SLC28A1O00337 HPRT1P1-201ENST00000509498 657 ntBASIC3.71□□□□□ -1.82
SLC28A1O00337 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.71□□□□□ -1.82
SLC28A1O00337 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.71□□□□□ -1.82
SLC28A1O00337 SNORA31.9-201ENST00000516429 84 ntBASIC3.71□□□□□ -1.82
SLC28A1O00337 IGKV2D-36-201ENST00000518643 226 ntBASIC3.71□□□□□ -1.82
SLC28A1O00337 RAB9BP1-201ENST00000519581 626 ntBASIC3.71□□□□□ -1.82
SLC28A1O00337 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.71□□□□□ -1.82
SLC28A1O00337 MRPL49P2-201ENST00000521066 465 ntBASIC3.71□□□□□ -1.82
SLC28A1O00337 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.71□□□□□ -1.82
SLC28A1O00337 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.71□□□□□ -1.82
SLC28A1O00337 LSM6P2-201ENST00000552208 177 ntBASIC3.71□□□□□ -1.82
SLC28A1O00337 AC023575.1-201ENST00000580510 358 ntBASIC3.71□□□□□ -1.82
SLC28A1O00337 AC112230.1-201ENST00000604342 547 ntBASIC3.71□□□□□ -1.82
SLC28A1O00337 AL137849.1-201ENST00000604767 169 ntBASIC3.71□□□□□ -1.82
SLC28A1O00337 AL513477.2-201ENST00000607858 568 ntBASIC3.71□□□□□ -1.82
SLC28A1O00337 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.71□□□□□ -1.82
SLC28A1O00337 MIR7641-1-201ENST00000627518 61 ntBASIC3.71□□□□□ -1.82
SLC28A1O00337 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.71□□□□□ -1.82
SLC28A1O00337 AC087821.2-201ENST00000637086 450 ntBASIC3.71□□□□□ -1.82
SLC28A1O00337 OR52H1-202ENST00000641796 1061 ntBASIC3.71□□□□□ -1.82
SLC28A1O00337 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.71□□□□□ -1.82
SLC28A1O00337 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.71□□□□□ -1.82
SLC28A1O00337 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SLC28A1O00337 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SLC28A1O00337 AC090337.1-201ENST00000579651 2074 ntBASIC3.71□□□□□ -1.82
SLC28A1O00337 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.7□□□□□ -1.82
SLC28A1O00337 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
SLC28A1O00337 CEP170P1-201ENST00000502249 4587 ntBASIC3.7□□□□□ -1.82
SLC28A1O00337 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
SLC28A1O00337 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SLC28A1O00337 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SLC28A1O00337 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.7□□□□□ -1.82
SLC28A1O00337 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SLC28A1O00337 RNU6-298P-201ENST00000390888 96 ntBASIC3.7□□□□□ -1.82
SLC28A1O00337 RNU6-1176P-201ENST00000390955 107 ntBASIC3.7□□□□□ -1.82
SLC28A1O00337 EIF5P1-201ENST00000400019 1231 ntBASIC3.7□□□□□ -1.82
SLC28A1O00337 AL133264.1-201ENST00000407157 562 ntBASIC3.7□□□□□ -1.82
SLC28A1O00337 RHEBP3-201ENST00000411920 351 ntBASIC3.7□□□□□ -1.82
SLC28A1O00337 RPL21P109-201ENST00000422213 475 ntBASIC3.7□□□□□ -1.82
SLC28A1O00337 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.7□□□□□ -1.82
SLC28A1O00337 MTCYBP42-201ENST00000444653 1130 ntBASIC3.7□□□□□ -1.82
SLC28A1O00337 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.7□□□□□ -1.82
SLC28A1O00337 MTND2P39-201ENST00000457230 764 ntBASIC3.7□□□□□ -1.82
SLC28A1O00337 RPL6P9-201ENST00000466502 859 ntBASIC3.7□□□□□ -1.82
SLC28A1O00337 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SLC28A1O00337 AC092045.1-201ENST00000495716 1231 ntBASIC3.7□□□□□ -1.82
SLC28A1O00337 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.7□□□□□ -1.82
SLC28A1O00337 NDUFA5P2-201ENST00000519723 344 ntBASIC3.7□□□□□ -1.82
SLC28A1O00337 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.7□□□□□ -1.82
SLC28A1O00337 AP000790.1-201ENST00000528891 737 ntBASIC3.7□□□□□ -1.82
SLC28A1O00337 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SLC28A1O00337 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.7□□□□□ -1.82
SLC28A1O00337 CBX3P5-201ENST00000552017 521 ntBASIC3.7□□□□□ -1.82
SLC28A1O00337 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.7□□□□□ -1.82
SLC28A1O00337 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.7□□□□□ -1.82
SLC28A1O00337 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.7□□□□□ -1.82
SLC28A1O00337 AC005412.1-201ENST00000580812 1049 ntBASIC3.7□□□□□ -1.82
SLC28A1O00337 AC090616.5-202ENST00000582111 297 ntBASIC3.7□□□□□ -1.82
SLC28A1O00337 MIR3939-201ENST00000582614 106 ntBASIC3.7□□□□□ -1.82
SLC28A1O00337 SNORD39.3-201ENST00000584451 71 ntBASIC3.7□□□□□ -1.82
SLC28A1O00337 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SLC28A1O00337 AC244505.7-201ENST00000599675 272 ntBASIC3.7□□□□□ -1.82
SLC28A1O00337 BNIP3P27-201ENST00000599991 412 ntBASIC3.7□□□□□ -1.82
SLC28A1O00337 GAS5-AS1-201ENST00000602767 694 ntBASIC3.7□□□□□ -1.82
SLC28A1O00337 BX323046.1-201ENST00000610145 535 ntBASIC3.7□□□□□ -1.82
SLC28A1O00337 AL592148.2-201ENST00000612210 372 ntBASIC3.7□□□□□ -1.82
SLC28A1O00337 AL713922.2-201ENST00000619384 716 ntBASIC3.7□□□□□ -1.82
SLC28A1O00337 AP003485.1-201ENST00000625093 753 ntBASIC3.7□□□□□ -1.82
SLC28A1O00337 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.7□□□□□ -1.82
SLC28A1O00337 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.7□□□□□ -1.82
SLC28A1O00337 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.7□□□□□ -1.82
SLC28A1O00337 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SLC28A1O00337 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.69□□□□□ -1.82
SLC28A1O00337 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SLC28A1O00337 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms