Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.69□□□□□ -1.82
PDLIM1O00151 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.69□□□□□ -1.82
PDLIM1O00151 AC025627.2-201ENST00000576220 160 ntBASIC3.69□□□□□ -1.82
PDLIM1O00151 AC090666.1-201ENST00000578241 445 ntBASIC3.69□□□□□ -1.82
PDLIM1O00151 AC126365.2-201ENST00000580630 379 ntBASIC3.69□□□□□ -1.82
PDLIM1O00151 MIR5684-201ENST00000585074 65 ntBASIC3.69□□□□□ -1.82
PDLIM1O00151 AC008507.2-201ENST00000588402 1176 ntBASIC3.69□□□□□ -1.82
PDLIM1O00151 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.69□□□□□ -1.82
PDLIM1O00151 AL390816.3-201ENST00000604527 1066 ntBASIC3.69□□□□□ -1.82
PDLIM1O00151 AC013468.1-201ENST00000608680 598 ntBASIC3.69□□□□□ -1.82
PDLIM1O00151 AC107294.3-201ENST00000609211 526 ntBASIC3.69□□□□□ -1.82
PDLIM1O00151 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.69□□□□□ -1.82
PDLIM1O00151 MIR7151-201ENST00000617477 60 ntBASIC3.69□□□□□ -1.82
PDLIM1O00151 MIR6864-201ENST00000617935 70 ntBASIC3.69□□□□□ -1.82
PDLIM1O00151 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.69□□□□□ -1.82
PDLIM1O00151 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PDLIM1O00151 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.69□□□□□ -1.82
PDLIM1O00151 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PDLIM1O00151 AC007256.1-201ENST00000392253 2765 ntBASIC3.68□□□□□ -1.82
PDLIM1O00151 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.68□□□□□ -1.82
PDLIM1O00151 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PDLIM1O00151 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PDLIM1O00151 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
PDLIM1O00151 RNU5B-4P-201ENST00000363508 111 ntBASIC3.68□□□□□ -1.82
PDLIM1O00151 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PDLIM1O00151 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.68□□□□□ -1.82
PDLIM1O00151 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.68□□□□□ -1.82
PDLIM1O00151 HMGB1P37-201ENST00000439613 609 ntBASIC3.68□□□□□ -1.82
PDLIM1O00151 AC000041.1-201ENST00000439655 175 ntBASIC3.68□□□□□ -1.82
PDLIM1O00151 RPS17P13-201ENST00000448974 407 ntBASIC3.68□□□□□ -1.82
PDLIM1O00151 CDC42P1-201ENST00000456658 548 ntBASIC3.68□□□□□ -1.82
PDLIM1O00151 RPS20P21-201ENST00000466859 343 ntBASIC3.68□□□□□ -1.82
PDLIM1O00151 RN7SL442P-201ENST00000473804 320 ntBASIC3.68□□□□□ -1.82
PDLIM1O00151 AC015724.1-201ENST00000478577 156 ntBASIC3.68□□□□□ -1.82
PDLIM1O00151 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.68□□□□□ -1.82
PDLIM1O00151 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.68□□□□□ -1.82
PDLIM1O00151 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PDLIM1O00151 PRELID3BP5-201ENST00000508612 460 ntBASIC3.68□□□□□ -1.82
PDLIM1O00151 AC008885.2-201ENST00000509506 930 ntBASIC3.68□□□□□ -1.82
PDLIM1O00151 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.68□□□□□ -1.82
PDLIM1O00151 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PDLIM1O00151 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.68□□□□□ -1.82
PDLIM1O00151 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.68□□□□□ -1.82
PDLIM1O00151 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.68□□□□□ -1.82
PDLIM1O00151 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.68□□□□□ -1.82
PDLIM1O00151 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.68□□□□□ -1.82
PDLIM1O00151 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.68□□□□□ -1.82
PDLIM1O00151 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.68□□□□□ -1.82
PDLIM1O00151 AC133794.1-201ENST00000602731 914 ntBASIC3.68□□□□□ -1.82
PDLIM1O00151 RNA5SP108-201ENST00000605921 117 ntBASIC3.68□□□□□ -1.82
PDLIM1O00151 AC124016.2-201ENST00000610058 665 ntBASIC3.68□□□□□ -1.82
PDLIM1O00151 MIR6798-201ENST00000612887 67 ntBASIC3.68□□□□□ -1.82
PDLIM1O00151 AC121761.2-201ENST00000617300 689 ntBASIC3.68□□□□□ -1.82
PDLIM1O00151 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.68□□□□□ -1.82
PDLIM1O00151 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.68□□□□□ -1.82
PDLIM1O00151 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
PDLIM1O00151 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
PDLIM1O00151 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
PDLIM1O00151 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.68□□□□□ -1.82
PDLIM1O00151 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.68□□□□□ -1.82
PDLIM1O00151 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.68□□□□□ -1.82
PDLIM1O00151 AL513302.2-201ENST00000562313 1842 ntBASIC3.67□□□□□ -1.82
PDLIM1O00151 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.67□□□□□ -1.82
PDLIM1O00151 AC026951.1-201ENST00000559530 2459 ntBASIC3.67□□□□□ -1.82
PDLIM1O00151 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.67□□□□□ -1.82
PDLIM1O00151 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.67□□□□□ -1.82
PDLIM1O00151 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.67□□□□□ -1.82
PDLIM1O00151 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
PDLIM1O00151 AL121657.1-201ENST00000327215 531 ntBASIC3.67□□□□□ -1.82
PDLIM1O00151 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
PDLIM1O00151 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
PDLIM1O00151 AP002088.1-201ENST00000382740 395 ntBASIC3.67□□□□□ -1.82
PDLIM1O00151 SNORA70E-201ENST00000384492 135 ntBASIC3.67□□□□□ -1.82
PDLIM1O00151 RPS26P8-201ENST00000393490 348 ntBASIC3.67□□□□□ -1.82
PDLIM1O00151 HLFP1-201ENST00000402375 499 ntBASIC3.67□□□□□ -1.82
PDLIM1O00151 OR8G2P-201ENST00000412796 908 ntBASIC3.67□□□□□ -1.82
PDLIM1O00151 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.67□□□□□ -1.82
PDLIM1O00151 GTF2IP23-201ENST00000423746 351 ntBASIC3.67□□□□□ -1.82
PDLIM1O00151 AC011242.1-201ENST00000433596 1158 ntBASIC3.67□□□□□ -1.82
PDLIM1O00151 RPS7P2-201ENST00000435134 607 ntBASIC3.67□□□□□ -1.82
PDLIM1O00151 RPL23AP22-201ENST00000437556 453 ntBASIC3.67□□□□□ -1.82
PDLIM1O00151 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.67□□□□□ -1.82
PDLIM1O00151 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.67□□□□□ -1.82
PDLIM1O00151 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.67□□□□□ -1.82
PDLIM1O00151 RNF2P1-201ENST00000442955 1010 ntBASIC3.67□□□□□ -1.82
PDLIM1O00151 AL592437.1-201ENST00000443781 492 ntBASIC3.67□□□□□ -1.82
PDLIM1O00151 AC125238.1-201ENST00000448842 249 ntBASIC3.67□□□□□ -1.82
PDLIM1O00151 NUTF2P7-201ENST00000453086 375 ntBASIC3.67□□□□□ -1.82
PDLIM1O00151 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.67□□□□□ -1.82
PDLIM1O00151 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.67□□□□□ -1.82
PDLIM1O00151 AC103987.1-201ENST00000473394 348 ntBASIC3.67□□□□□ -1.82
PDLIM1O00151 AC091959.2-201ENST00000477363 321 ntBASIC3.67□□□□□ -1.82
PDLIM1O00151 TRBV12-2-201ENST00000489763 344 ntBASIC3.67□□□□□ -1.82
PDLIM1O00151 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.67□□□□□ -1.82
PDLIM1O00151 MTND3P3-201ENST00000505004 126 ntBASIC3.67□□□□□ -1.82
PDLIM1O00151 PTGES3P3-201ENST00000511479 482 ntBASIC3.67□□□□□ -1.82
PDLIM1O00151 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PDLIM1O00151 SNORA31.9-201ENST00000516429 84 ntBASIC3.67□□□□□ -1.82
PDLIM1O00151 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.67□□□□□ -1.82
PDLIM1O00151 IGJP1-201ENST00000522682 475 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms