Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC008072.1-201ENST00000434254 824 ntBASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 SNRPEP4-201ENST00000435815 279 ntBASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 AC129850.1-201ENST00000436203 508 ntBASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 MTND2P8-201ENST00000450555 1025 ntBASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 NPM1P13-201ENST00000452663 865 ntBASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 RPL23AP24-201ENST00000458203 385 ntBASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 AC010301.1-201ENST00000473936 355 ntBASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 MTND3P24-201ENST00000506306 329 ntBASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 RN7SKP70-201ENST00000516655 271 ntBASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 YPEL5P3-201ENST00000547227 352 ntBASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 AC244100.1-202ENST00000621554 382 ntBASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 AC103798.2-201ENST00000624292 632 ntBASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 AC092159.4-201ENST00000624944 550 ntBASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 BCLAF1P1-201ENST00000505813 2752 ntBASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 AC093536.2-201ENST00000565257 1406 ntBASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
CHKB-CPT1BH3BT56 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 ASNSP3-201ENST00000451989 1306 ntBASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 FRG1CP-201ENST00000358464 769 ntBASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 RNA5SP391-201ENST00000363456 119 ntBASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 RNVU1-6-201ENST00000364688 164 ntBASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 RPL23AP59-201ENST00000399415 461 ntBASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 RNU2-21P-201ENST00000410368 188 ntBASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 RNA5SP38-201ENST00000410750 119 ntBASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 AL645937.1-202ENST00000421799 937 ntBASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 ETF1P3-201ENST00000430422 1160 ntBASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 AC073901.1-201ENST00000462471 408 ntBASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 COPS8P2-201ENST00000473228 627 ntBASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 GAPDHP39-201ENST00000481866 979 ntBASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 RAD51AP1P1-201ENST00000484195 1001 ntBASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 RN7SL101P-201ENST00000496350 279 ntBASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 AC135721.1-201ENST00000497954 479 ntBASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 AC008716.1-201ENST00000511084 513 ntBASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 RNU1-104P-201ENST00000517280 175 ntBASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 AC026241.1-201ENST00000517873 2142 ntBASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 NDUFA5P2-201ENST00000519723 344 ntBASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 AC034205.1-201ENST00000520621 638 ntBASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 AP004371.1-201ENST00000525240 214 ntBASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 AC022690.1-201ENST00000526681 550 ntBASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 AC019227.1-201ENST00000526902 510 ntBASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 CASP1-216ENST00000534497 825 ntTSL 5 BASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 AC120057.2-201ENST00000571520 271 ntBASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 AC115085.1-201ENST00000588924 229 ntBASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 AC010620.2-201ENST00000600135 313 ntBASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 AC055764.2-201ENST00000610089 670 ntBASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 DLEU2_6.1-201ENST00000610536 112 ntBASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 MIR6864-201ENST00000617935 70 ntBASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 AC087385.3-201ENST00000620477 187 ntBASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 AC073342.3-201ENST00000624211 193 ntBASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 AC135776.4-201ENST00000624300 1904 ntBASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 AC022306.1-201ENST00000560489 1562 ntBASIC1.71□□□□□ -2.14
CHKB-CPT1BH3BT56 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms