Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HFM1A2PYH4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HFM1A2PYH4 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
HFM1A2PYH4 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.35□□□□□ -1.71
HFM1A2PYH4 RNU6-851P-201ENST00000384565 107 ntBASIC4.35□□□□□ -1.71
HFM1A2PYH4 NIPA2P5-201ENST00000452282 464 ntBASIC4.35□□□□□ -1.71
HFM1A2PYH4 RN7SL75P-201ENST00000461926 281 ntBASIC4.35□□□□□ -1.71
HFM1A2PYH4 RN7SL633P-201ENST00000488974 297 ntBASIC4.35□□□□□ -1.71
HFM1A2PYH4 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.35□□□□□ -1.71
HFM1A2PYH4 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.35□□□□□ -1.71
HFM1A2PYH4 TXNP6-201ENST00000510190 310 ntBASIC4.35□□□□□ -1.71
HFM1A2PYH4 AF186190.1-201ENST00000517470 480 ntBASIC4.35□□□□□ -1.71
HFM1A2PYH4 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HFM1A2PYH4 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
HFM1A2PYH4 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HFM1A2PYH4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HFM1A2PYH4 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
HFM1A2PYH4 AC062016.1-201ENST00000355719 319 ntBASIC4.34□□□□□ -1.71
HFM1A2PYH4 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
HFM1A2PYH4 AL645937.1-202ENST00000421799 937 ntBASIC4.34□□□□□ -1.71
HFM1A2PYH4 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.34□□□□□ -1.71
HFM1A2PYH4 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.34□□□□□ -1.71
HFM1A2PYH4 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC4.34□□□□□ -1.71
HFM1A2PYH4 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.34□□□□□ -1.71
HFM1A2PYH4 AC068657.1-201ENST00000520807 306 ntBASIC4.34□□□□□ -1.71
HFM1A2PYH4 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.34□□□□□ -1.71
HFM1A2PYH4 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.34□□□□□ -1.71
HFM1A2PYH4 CYCSP39-201ENST00000565821 309 ntBASIC4.34□□□□□ -1.71
HFM1A2PYH4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HFM1A2PYH4 AC103881.1-201ENST00000603476 538 ntBASIC4.34□□□□□ -1.71
HFM1A2PYH4 AC110741.2-201ENST00000605278 268 ntBASIC4.34□□□□□ -1.71
HFM1A2PYH4 AC022509.4-201ENST00000621404 572 ntBASIC4.34□□□□□ -1.71
HFM1A2PYH4 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HFM1A2PYH4 THAP12P8-201ENST00000447914 2115 ntBASIC4.34□□□□□ -1.72
HFM1A2PYH4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
HFM1A2PYH4 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.33□□□□□ -1.72
HFM1A2PYH4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HFM1A2PYH4 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HFM1A2PYH4 TTC39DP-201ENST00000416781 1688 ntBASIC4.33□□□□□ -1.72
HFM1A2PYH4 RNA5SP274-201ENST00000410484 108 ntBASIC4.33□□□□□ -1.72
HFM1A2PYH4 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.33□□□□□ -1.72
HFM1A2PYH4 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.33□□□□□ -1.72
HFM1A2PYH4 AC006840.1-201ENST00000623069 542 ntBASIC4.33□□□□□ -1.72
HFM1A2PYH4 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.33□□□□□ -1.72
HFM1A2PYH4 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HFM1A2PYH4 AC007390.2-201ENST00000606229 3803 ntBASIC4.32□□□□□ -1.72
HFM1A2PYH4 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HFM1A2PYH4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC4.32□□□□□ -1.72
HFM1A2PYH4 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.32□□□□□ -1.72
HFM1A2PYH4 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.32□□□□□ -1.72
HFM1A2PYH4 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.32□□□□□ -1.72
HFM1A2PYH4 AC114967.1-201ENST00000504890 259 ntBASIC4.32□□□□□ -1.72
HFM1A2PYH4 AC079600.2-201ENST00000550076 130 ntBASIC4.32□□□□□ -1.72
HFM1A2PYH4 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.32□□□□□ -1.72
HFM1A2PYH4 AL359757.2-201ENST00000624309 274 ntBASIC4.32□□□□□ -1.72
HFM1A2PYH4 AC093831.2-201ENST00000624393 3427 ntBASIC4.32□□□□□ -1.72
HFM1A2PYH4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
HFM1A2PYH4 NUP35P1-201ENST00000422734 947 ntBASIC4.31□□□□□ -1.72
HFM1A2PYH4 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.31□□□□□ -1.72
HFM1A2PYH4 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.31□□□□□ -1.72
HFM1A2PYH4 AL162389.1-201ENST00000449233 177 ntBASIC4.31□□□□□ -1.72
HFM1A2PYH4 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC4.31□□□□□ -1.72
HFM1A2PYH4 RN7SKP43-201ENST00000516173 320 ntBASIC4.31□□□□□ -1.72
HFM1A2PYH4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HFM1A2PYH4 AC107016.2-201ENST00000547968 190 ntBASIC4.31□□□□□ -1.72
HFM1A2PYH4 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.31□□□□□ -1.72
HFM1A2PYH4 MIR4319-201ENST00000577285 85 ntBASIC4.31□□□□□ -1.72
HFM1A2PYH4 ELOCP29-201ENST00000588193 334 ntBASIC4.31□□□□□ -1.72
HFM1A2PYH4 ATP1B3P1-201ENST00000605365 821 ntBASIC4.31□□□□□ -1.72
HFM1A2PYH4 PLCE1P1-201ENST00000622094 305 ntBASIC4.31□□□□□ -1.72
HFM1A2PYH4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HFM1A2PYH4 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
HFM1A2PYH4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HFM1A2PYH4 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
HFM1A2PYH4 OOSP1P1-201ENST00000423265 274 ntBASIC4.3□□□□□ -1.72
HFM1A2PYH4 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.3□□□□□ -1.72
HFM1A2PYH4 RPL7P59-201ENST00000447700 943 ntBASIC4.3□□□□□ -1.72
HFM1A2PYH4 AC117522.3-201ENST00000507974 584 ntBASIC4.3□□□□□ -1.72
HFM1A2PYH4 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.3□□□□□ -1.72
HFM1A2PYH4 AC007336.1-201ENST00000576365 3828 ntBASIC4.3□□□□□ -1.72
HFM1A2PYH4 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HFM1A2PYH4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
HFM1A2PYH4 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
HFM1A2PYH4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
HFM1A2PYH4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HFM1A2PYH4 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HFM1A2PYH4 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.3□□□□□ -1.72
HFM1A2PYH4 RPL21P3-201ENST00000395517 478 ntBASIC4.29□□□□□ -1.72
HFM1A2PYH4 AC146507.2-201ENST00000460608 476 ntBASIC4.29□□□□□ -1.72
HFM1A2PYH4 METTL15P1-201ENST00000481421 1045 ntBASIC4.29□□□□□ -1.72
HFM1A2PYH4 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.29□□□□□ -1.72
HFM1A2PYH4 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.29□□□□□ -1.72
HFM1A2PYH4 RNA5SP367-201ENST00000516557 118 ntBASIC4.29□□□□□ -1.72
HFM1A2PYH4 snoU109.6-201ENST00000516831 118 ntBASIC4.29□□□□□ -1.72
HFM1A2PYH4 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.29□□□□□ -1.72
HFM1A2PYH4 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.29□□□□□ -1.72
HFM1A2PYH4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
HFM1A2PYH4 AC005183.1-201ENST00000603687 1979 ntBASIC4.29□□□□□ -1.72
HFM1A2PYH4 SNORA70E-201ENST00000384492 135 ntBASIC4.29□□□□□ -1.72
HFM1A2PYH4 RPL29P29-201ENST00000448725 423 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms