Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 ZNF833P-201ENST00000424938 1494 ntBASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 Y_RNA.51-201ENST00000362725 102 ntBASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 RNA5SP505-201ENST00000364748 108 ntBASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 RNU6-146P-201ENST00000384602 108 ntBASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 MIR649-201ENST00000384843 97 ntBASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 SNORA11F-201ENST00000408237 128 ntBASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 BTF3L4P1-201ENST00000413813 468 ntBASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 AC004690.1-201ENST00000418216 328 ntBASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 AL356387.2-201ENST00000422272 243 ntBASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 RBMY1KP-201ENST00000423480 476 ntBASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 AL157831.1-201ENST00000426134 473 ntBASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 MTND1P20-201ENST00000430341 950 ntBASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 THAP5P1-201ENST00000439089 262 ntBASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 RPL23AP89-201ENST00000439324 255 ntBASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 MTCO3P2-201ENST00000457365 171 ntBASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 AC010683.1-201ENST00000473673 378 ntBASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 RPL23AP72-201ENST00000492447 435 ntBASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 DSTNP2-201ENST00000504533 515 ntBASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 DEFB131D-201ENST00000526803 184 ntBASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 TRAV8-5-201ENST00000537369 341 ntBASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 AC024909.2-201ENST00000553035 286 ntBASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 AC008638.3-201ENST00000603341 463 ntBASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 AL596327.1-201ENST00000603629 213 ntBASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 AL139395.1-201ENST00000603662 160 ntBASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 AC233280.2-201ENST00000603917 1070 ntBASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 AC113403.1-201ENST00000604910 193 ntBASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 uc_338.13-201ENST00000618243 179 ntBASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 AC008785.1-201ENST00000624475 456 ntBASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 SAGE4P-201ENST00000442271 3381 ntBASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 CYP1D1P-201ENST00000416662 1433 ntBASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 SNORD74.4-201ENST00000364129 80 ntBASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 RNU6-657P-201ENST00000383904 107 ntBASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 AC004022.2-201ENST00000413824 193 ntBASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 NPM1P11-201ENST00000417106 855 ntBASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 MTCO2P7-201ENST00000446518 666 ntBASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 EIF4A1P11-201ENST00000451239 222 ntBASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 MTCO3P16-201ENST00000454456 754 ntBASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 RN7SL585P-201ENST00000470538 280 ntBASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 AC072039.1-201ENST00000477611 581 ntBASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 AC109486.1-201ENST00000486833 374 ntBASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 MTCYBP17-201ENST00000503579 789 ntBASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 MTATP6P22-201ENST00000507369 598 ntBASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 PARP4P3-201ENST00000510265 317 ntBASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 MTND5P13-201ENST00000513046 1079 ntBASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 NDUFA5P2-201ENST00000519723 344 ntBASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 AL121766.1-201ENST00000547436 487 ntBASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 AC063949.1-201ENST00000552900 865 ntBASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.32□□□□□ -1.72
TCRBV7S3A2A0A539 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms