Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 LINC01465-201ENST00000408887 1940 ntBASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 RCN1P1-201ENST00000400413 996 ntBASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 AC073195.1-201ENST00000607241 877 ntBASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 AC004264.1-201ENST00000608354 794 ntBASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HRH3Q9Y5N1 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
HRH3Q9Y5N1 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HRH3Q9Y5N1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HRH3Q9Y5N1 MMP23A-201ENST00000234610 1017 ntBASIC17.78■□□□□ 0.44
HRH3Q9Y5N1 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HRH3Q9Y5N1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
HRH3Q9Y5N1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.78■□□□□ 0.44
HRH3Q9Y5N1 TUBB8P6-201ENST00000436895 1288 ntBASIC17.78■□□□□ 0.44
HRH3Q9Y5N1 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.78■□□□□ 0.44
HRH3Q9Y5N1 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.78■□□□□ 0.44
HRH3Q9Y5N1 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.78■□□□□ 0.44
HRH3Q9Y5N1 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.78■□□□□ 0.44
HRH3Q9Y5N1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.78■□□□□ 0.44
HRH3Q9Y5N1 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.78■□□□□ 0.44
HRH3Q9Y5N1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HRH3Q9Y5N1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HRH3Q9Y5N1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.78■□□□□ 0.44
HRH3Q9Y5N1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
HRH3Q9Y5N1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HRH3Q9Y5N1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HRH3Q9Y5N1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HRH3Q9Y5N1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.78■□□□□ 0.44
HRH3Q9Y5N1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.78■□□□□ 0.44
HRH3Q9Y5N1 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HRH3Q9Y5N1 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HRH3Q9Y5N1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.77■□□□□ 0.44
HRH3Q9Y5N1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
HRH3Q9Y5N1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
HRH3Q9Y5N1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HRH3Q9Y5N1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HRH3Q9Y5N1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HRH3Q9Y5N1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HRH3Q9Y5N1 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HRH3Q9Y5N1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HRH3Q9Y5N1 AL353807.1-201ENST00000427475 662 ntBASIC17.77■□□□□ 0.44
HRH3Q9Y5N1 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.77■□□□□ 0.44
HRH3Q9Y5N1 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.77■□□□□ 0.44
HRH3Q9Y5N1 HLA-A-209ENST00000638375 975 ntBASIC17.77■□□□□ 0.44
HRH3Q9Y5N1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HRH3Q9Y5N1 KRT8P9-201ENST00000558927 1449 ntBASIC17.77■□□□□ 0.44
HRH3Q9Y5N1 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HRH3Q9Y5N1 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
HRH3Q9Y5N1 AIRN-201ENST00000601203 4374 ntBASIC17.77■□□□□ 0.43
HRH3Q9Y5N1 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HRH3Q9Y5N1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HRH3Q9Y5N1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HRH3Q9Y5N1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.77■□□□□ 0.43
HRH3Q9Y5N1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.76■□□□□ 0.43
HRH3Q9Y5N1 AC079598.2-202ENST00000546624 1451 ntBASIC17.76■□□□□ 0.43
HRH3Q9Y5N1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.76■□□□□ 0.43
HRH3Q9Y5N1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.76■□□□□ 0.43
HRH3Q9Y5N1 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.76■□□□□ 0.43
HRH3Q9Y5N1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HRH3Q9Y5N1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HRH3Q9Y5N1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HRH3Q9Y5N1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.76■□□□□ 0.43
HRH3Q9Y5N1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HRH3Q9Y5N1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
HRH3Q9Y5N1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.76■□□□□ 0.43
HRH3Q9Y5N1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HRH3Q9Y5N1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
HRH3Q9Y5N1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.76■□□□□ 0.43
HRH3Q9Y5N1 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HRH3Q9Y5N1 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HRH3Q9Y5N1 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.76■□□□□ 0.43
HRH3Q9Y5N1 REXO1L10P-201ENST00000615707 1290 ntBASIC17.76■□□□□ 0.43
HRH3Q9Y5N1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.76■□□□□ 0.43
HRH3Q9Y5N1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HRH3Q9Y5N1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HRH3Q9Y5N1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HRH3Q9Y5N1 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
HRH3Q9Y5N1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HRH3Q9Y5N1 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms