Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SPG7Q9UQ90 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC25.19■■□□□ 1.62
SPG7Q9UQ90 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
SPG7Q9UQ90 TOLLIP-AS1-201ENST00000530897 939 ntBASIC25.19■■□□□ 1.62
SPG7Q9UQ90 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SPG7Q9UQ90 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
SPG7Q9UQ90 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC25.19■■□□□ 1.62
SPG7Q9UQ90 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
SPG7Q9UQ90 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SPG7Q9UQ90 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC25.19■■□□□ 1.62
SPG7Q9UQ90 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SPG7Q9UQ90 AL391422.3-201ENST00000603791 2761 ntBASIC25.18■■□□□ 1.62
SPG7Q9UQ90 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC25.18■■□□□ 1.62
SPG7Q9UQ90 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SPG7Q9UQ90 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
SPG7Q9UQ90 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SPG7Q9UQ90 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
SPG7Q9UQ90 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC25.18■■□□□ 1.62
SPG7Q9UQ90 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC25.18■■□□□ 1.62
SPG7Q9UQ90 BUB3-202ENST00000368859 667 ntTSL 3 BASIC25.18■■□□□ 1.62
SPG7Q9UQ90 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC25.18■■□□□ 1.62
SPG7Q9UQ90 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC25.18■■□□□ 1.62
SPG7Q9UQ90 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SPG7Q9UQ90 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC25.18■■□□□ 1.62
SPG7Q9UQ90 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SPG7Q9UQ90 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SPG7Q9UQ90 GABARAPL3-202ENST00000624044 1851 ntBASIC25.17■■□□□ 1.62
SPG7Q9UQ90 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SPG7Q9UQ90 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC25.17■■□□□ 1.62
SPG7Q9UQ90 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SPG7Q9UQ90 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC25.17■■□□□ 1.62
SPG7Q9UQ90 AL136038.3-201ENST00000561909 1096 ntBASIC25.17■■□□□ 1.62
SPG7Q9UQ90 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC25.17■■□□□ 1.62
SPG7Q9UQ90 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC25.17■■□□□ 1.62
SPG7Q9UQ90 AC093458.2-201ENST00000623150 629 ntBASIC25.17■■□□□ 1.62
SPG7Q9UQ90 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SPG7Q9UQ90 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SPG7Q9UQ90 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SPG7Q9UQ90 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
SPG7Q9UQ90 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SPG7Q9UQ90 STARP1-201ENST00000397973 869 ntBASIC25.16■■□□□ 1.62
SPG7Q9UQ90 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SPG7Q9UQ90 AC112907.2-201ENST00000448639 330 ntBASIC25.16■■□□□ 1.62
SPG7Q9UQ90 GCSHP2-201ENST00000560971 527 ntBASIC25.16■■□□□ 1.62
SPG7Q9UQ90 DFFB-212ENST00000625756 649 ntTSL 5 BASIC25.16■■□□□ 1.62
SPG7Q9UQ90 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
SPG7Q9UQ90 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SPG7Q9UQ90 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SPG7Q9UQ90 AC104417.2-201ENST00000562989 1793 ntBASIC25.16■■□□□ 1.62
SPG7Q9UQ90 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
SPG7Q9UQ90 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
SPG7Q9UQ90 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC25.15■■□□□ 1.62
SPG7Q9UQ90 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SPG7Q9UQ90 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC25.15■■□□□ 1.62
SPG7Q9UQ90 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC25.15■■□□□ 1.62
SPG7Q9UQ90 PTK2-216ENST00000519881 863 ntTSL 3 BASIC25.15■■□□□ 1.62
SPG7Q9UQ90 VENTXP5-201ENST00000523979 775 ntBASIC25.15■■□□□ 1.62
SPG7Q9UQ90 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC25.15■■□□□ 1.62
SPG7Q9UQ90 KRT126P-201ENST00000549467 1181 ntBASIC25.15■■□□□ 1.62
SPG7Q9UQ90 MIR4674-201ENST00000582457 87 ntBASIC25.15■■□□□ 1.62
SPG7Q9UQ90 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SPG7Q9UQ90 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC25.15■■□□□ 1.62
SPG7Q9UQ90 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SPG7Q9UQ90 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
SPG7Q9UQ90 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC25.15■■□□□ 1.62
SPG7Q9UQ90 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SPG7Q9UQ90 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC25.14■■□□□ 1.62
SPG7Q9UQ90 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
SPG7Q9UQ90 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SPG7Q9UQ90 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
SPG7Q9UQ90 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC25.14■■□□□ 1.62
SPG7Q9UQ90 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SPG7Q9UQ90 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SPG7Q9UQ90 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC25.14■■□□□ 1.62
SPG7Q9UQ90 KRT18P48-201ENST00000434763 852 ntBASIC25.14■■□□□ 1.62
SPG7Q9UQ90 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC25.14■■□□□ 1.62
SPG7Q9UQ90 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC25.14■■□□□ 1.62
SPG7Q9UQ90 TBC1D3P2-202ENST00000577902 1649 ntBASIC25.14■■□□□ 1.61
SPG7Q9UQ90 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SPG7Q9UQ90 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SPG7Q9UQ90 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC25.14■■□□□ 1.61
SPG7Q9UQ90 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC25.13■■□□□ 1.61
SPG7Q9UQ90 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC25.13■■□□□ 1.61
SPG7Q9UQ90 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SPG7Q9UQ90 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SPG7Q9UQ90 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SPG7Q9UQ90 LY6E-213ENST00000522528 606 ntTSL 3 BASIC25.13■■□□□ 1.61
SPG7Q9UQ90 ZNF444P1-201ENST00000559497 298 ntBASIC25.13■■□□□ 1.61
SPG7Q9UQ90 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC25.13■■□□□ 1.61
SPG7Q9UQ90 AC083849.1-201ENST00000615227 514 ntBASIC25.13■■□□□ 1.61
SPG7Q9UQ90 HYMAI.1-201ENST00000620949 238 ntBASIC25.13■■□□□ 1.61
SPG7Q9UQ90 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC25.13■■□□□ 1.61
SPG7Q9UQ90 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
SPG7Q9UQ90 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
SPG7Q9UQ90 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
SPG7Q9UQ90 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
SPG7Q9UQ90 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC25.13■■□□□ 1.61
SPG7Q9UQ90 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SPG7Q9UQ90 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC25.12■■□□□ 1.61
SPG7Q9UQ90 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms