Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LHX6Q9UPM6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.21■□□□□ 0.51
LHX6Q9UPM6 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.21■□□□□ 0.51
LHX6Q9UPM6 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.21■□□□□ 0.51
LHX6Q9UPM6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LHX6Q9UPM6 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LHX6Q9UPM6 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.21■□□□□ 0.51
LHX6Q9UPM6 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LHX6Q9UPM6 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.21■□□□□ 0.51
LHX6Q9UPM6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.21■□□□□ 0.51
LHX6Q9UPM6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LHX6Q9UPM6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
LHX6Q9UPM6 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LHX6Q9UPM6 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
LHX6Q9UPM6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.2■□□□□ 0.5
LHX6Q9UPM6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.2■□□□□ 0.5
LHX6Q9UPM6 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LHX6Q9UPM6 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LHX6Q9UPM6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LHX6Q9UPM6 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LHX6Q9UPM6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.2■□□□□ 0.5
LHX6Q9UPM6 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.2■□□□□ 0.5
LHX6Q9UPM6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LHX6Q9UPM6 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.2■□□□□ 0.5
LHX6Q9UPM6 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC18.2■□□□□ 0.5
LHX6Q9UPM6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.2■□□□□ 0.5
LHX6Q9UPM6 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
LHX6Q9UPM6 SLC25A6P4-201ENST00000586535 553 ntBASIC18.2■□□□□ 0.5
LHX6Q9UPM6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.2■□□□□ 0.5
LHX6Q9UPM6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.2■□□□□ 0.5
LHX6Q9UPM6 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LHX6Q9UPM6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LHX6Q9UPM6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LHX6Q9UPM6 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.19■□□□□ 0.5
LHX6Q9UPM6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LHX6Q9UPM6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LHX6Q9UPM6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LHX6Q9UPM6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LHX6Q9UPM6 AC096733.2-201ENST00000609937 1394 ntBASIC18.19■□□□□ 0.5
LHX6Q9UPM6 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LHX6Q9UPM6 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LHX6Q9UPM6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
LHX6Q9UPM6 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.19■□□□□ 0.5
LHX6Q9UPM6 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.19■□□□□ 0.5
LHX6Q9UPM6 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LHX6Q9UPM6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LHX6Q9UPM6 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LHX6Q9UPM6 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LHX6Q9UPM6 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LHX6Q9UPM6 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LHX6Q9UPM6 KRT8P8-201ENST00000434750 1448 ntBASIC18.19■□□□□ 0.5
LHX6Q9UPM6 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.19■□□□□ 0.5
LHX6Q9UPM6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
LHX6Q9UPM6 NUS1P1-201ENST00000446295 882 ntBASIC18.19■□□□□ 0.5
LHX6Q9UPM6 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.19■□□□□ 0.5
LHX6Q9UPM6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.19■□□□□ 0.5
LHX6Q9UPM6 AC106795.1-205ENST00000512851 1056 ntBASIC18.19■□□□□ 0.5
LHX6Q9UPM6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LHX6Q9UPM6 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
LHX6Q9UPM6 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
LHX6Q9UPM6 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
LHX6Q9UPM6 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LHX6Q9UPM6 HYMAI.1-201ENST00000620949 238 ntBASIC18.19■□□□□ 0.5
LHX6Q9UPM6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LHX6Q9UPM6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LHX6Q9UPM6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LHX6Q9UPM6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LHX6Q9UPM6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LHX6Q9UPM6 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.19■□□□□ 0.5
LHX6Q9UPM6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.18■□□□□ 0.5
LHX6Q9UPM6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LHX6Q9UPM6 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.18■□□□□ 0.5
LHX6Q9UPM6 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LHX6Q9UPM6 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LHX6Q9UPM6 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
LHX6Q9UPM6 RCC2P6-201ENST00000526625 1557 ntBASIC18.18■□□□□ 0.5
LHX6Q9UPM6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LHX6Q9UPM6 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.18■□□□□ 0.5
LHX6Q9UPM6 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.18■□□□□ 0.5
LHX6Q9UPM6 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LHX6Q9UPM6 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC18.18■□□□□ 0.5
LHX6Q9UPM6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.18■□□□□ 0.5
LHX6Q9UPM6 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.18■□□□□ 0.5
LHX6Q9UPM6 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LHX6Q9UPM6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.18■□□□□ 0.5
LHX6Q9UPM6 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LHX6Q9UPM6 LINC01711-201ENST00000598340 967 ntBASIC18.18■□□□□ 0.5
LHX6Q9UPM6 BX640515.1-201ENST00000617215 977 ntBASIC18.18■□□□□ 0.5
LHX6Q9UPM6 AC022726.2-201ENST00000634673 547 ntBASIC18.18■□□□□ 0.5
LHX6Q9UPM6 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LHX6Q9UPM6 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
LHX6Q9UPM6 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LHX6Q9UPM6 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LHX6Q9UPM6 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LHX6Q9UPM6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
LHX6Q9UPM6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LHX6Q9UPM6 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LHX6Q9UPM6 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.17■□□□□ 0.5
LHX6Q9UPM6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LHX6Q9UPM6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms