Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VAPAQ9P0L0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VAPAQ9P0L0 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
VAPAQ9P0L0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
VAPAQ9P0L0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VAPAQ9P0L0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VAPAQ9P0L0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.21■□□□□ 0.51
VAPAQ9P0L0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.21■□□□□ 0.51
VAPAQ9P0L0 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.21■□□□□ 0.51
VAPAQ9P0L0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.21■□□□□ 0.51
VAPAQ9P0L0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VAPAQ9P0L0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.21■□□□□ 0.51
VAPAQ9P0L0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.21■□□□□ 0.51
VAPAQ9P0L0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
VAPAQ9P0L0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VAPAQ9P0L0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.21■□□□□ 0.51
VAPAQ9P0L0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.21■□□□□ 0.51
VAPAQ9P0L0 AL512353.2-201ENST00000448759 1962 ntBASIC18.21■□□□□ 0.51
VAPAQ9P0L0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
VAPAQ9P0L0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VAPAQ9P0L0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VAPAQ9P0L0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VAPAQ9P0L0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
VAPAQ9P0L0 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.21■□□□□ 0.51
VAPAQ9P0L0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.21■□□□□ 0.51
VAPAQ9P0L0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.21■□□□□ 0.51
VAPAQ9P0L0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.21■□□□□ 0.51
VAPAQ9P0L0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
VAPAQ9P0L0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.21■□□□□ 0.51
VAPAQ9P0L0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.21■□□□□ 0.51
VAPAQ9P0L0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.21■□□□□ 0.51
VAPAQ9P0L0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VAPAQ9P0L0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
VAPAQ9P0L0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
VAPAQ9P0L0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VAPAQ9P0L0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VAPAQ9P0L0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
VAPAQ9P0L0 KRT8P8-201ENST00000434750 1448 ntBASIC18.21■□□□□ 0.51
VAPAQ9P0L0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
VAPAQ9P0L0 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.21■□□□□ 0.51
VAPAQ9P0L0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
VAPAQ9P0L0 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VAPAQ9P0L0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VAPAQ9P0L0 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VAPAQ9P0L0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.2■□□□□ 0.5
VAPAQ9P0L0 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VAPAQ9P0L0 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
VAPAQ9P0L0 MIR663A-201ENST00000385250 93 ntBASIC18.2■□□□□ 0.5
VAPAQ9P0L0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.2■□□□□ 0.5
VAPAQ9P0L0 DUSP5P2-201ENST00000426873 1033 ntBASIC18.2■□□□□ 0.5
VAPAQ9P0L0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VAPAQ9P0L0 AC026471.1-201ENST00000564629 3026 ntBASIC18.2■□□□□ 0.5
VAPAQ9P0L0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.2■□□□□ 0.5
VAPAQ9P0L0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.2■□□□□ 0.5
VAPAQ9P0L0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.2■□□□□ 0.5
VAPAQ9P0L0 AC090164.3-201ENST00000610780 2143 ntBASIC18.2■□□□□ 0.5
VAPAQ9P0L0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VAPAQ9P0L0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.2■□□□□ 0.5
VAPAQ9P0L0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
VAPAQ9P0L0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
VAPAQ9P0L0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.2■□□□□ 0.5
VAPAQ9P0L0 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.19■□□□□ 0.5
VAPAQ9P0L0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VAPAQ9P0L0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VAPAQ9P0L0 AC135050.7-201ENST00000624508 2218 ntBASIC18.19■□□□□ 0.5
VAPAQ9P0L0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
VAPAQ9P0L0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
VAPAQ9P0L0 AP006587.1-201ENST00000534129 1502 ntBASIC18.19■□□□□ 0.5
VAPAQ9P0L0 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VAPAQ9P0L0 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VAPAQ9P0L0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VAPAQ9P0L0 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VAPAQ9P0L0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
VAPAQ9P0L0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VAPAQ9P0L0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.19■□□□□ 0.5
VAPAQ9P0L0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VAPAQ9P0L0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.19■□□□□ 0.5
VAPAQ9P0L0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VAPAQ9P0L0 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.19■□□□□ 0.5
VAPAQ9P0L0 MIPEPP3-201ENST00000412105 444 ntBASIC18.19■□□□□ 0.5
VAPAQ9P0L0 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
VAPAQ9P0L0 YBX1P10-201ENST00000444752 975 ntBASIC18.19■□□□□ 0.5
VAPAQ9P0L0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.19■□□□□ 0.5
VAPAQ9P0L0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.19■□□□□ 0.5
VAPAQ9P0L0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.19■□□□□ 0.5
VAPAQ9P0L0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VAPAQ9P0L0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
VAPAQ9P0L0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
VAPAQ9P0L0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VAPAQ9P0L0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VAPAQ9P0L0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VAPAQ9P0L0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VAPAQ9P0L0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VAPAQ9P0L0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VAPAQ9P0L0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VAPAQ9P0L0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
VAPAQ9P0L0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
VAPAQ9P0L0 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.18■□□□□ 0.5
VAPAQ9P0L0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VAPAQ9P0L0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms