Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SDHAF3Q9NRP4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SDHAF3Q9NRP4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SDHAF3Q9NRP4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.69■□□□□ 0.42
SDHAF3Q9NRP4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SDHAF3Q9NRP4 AC125437.2-201ENST00000625180 2167 ntBASIC17.69■□□□□ 0.42
SDHAF3Q9NRP4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SDHAF3Q9NRP4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SDHAF3Q9NRP4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SDHAF3Q9NRP4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SDHAF3Q9NRP4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SDHAF3Q9NRP4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SDHAF3Q9NRP4 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.69■□□□□ 0.42
SDHAF3Q9NRP4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.69■□□□□ 0.42
SDHAF3Q9NRP4 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.69■□□□□ 0.42
SDHAF3Q9NRP4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SDHAF3Q9NRP4 AL049637.2-201ENST00000641778 930 ntBASIC17.69■□□□□ 0.42
SDHAF3Q9NRP4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.69■□□□□ 0.42
SDHAF3Q9NRP4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SDHAF3Q9NRP4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SDHAF3Q9NRP4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SDHAF3Q9NRP4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SDHAF3Q9NRP4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SDHAF3Q9NRP4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 BCL2-203ENST00000589955 5011 ntBASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 Z99916.2-201ENST00000604037 246 ntBASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 CD177P1-201ENST00000606252 935 ntBASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SDHAF3Q9NRP4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.67■□□□□ 0.42
SDHAF3Q9NRP4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SDHAF3Q9NRP4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SDHAF3Q9NRP4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SDHAF3Q9NRP4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.67■□□□□ 0.42
SDHAF3Q9NRP4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SDHAF3Q9NRP4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SDHAF3Q9NRP4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SDHAF3Q9NRP4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SDHAF3Q9NRP4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.67■□□□□ 0.42
SDHAF3Q9NRP4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.67■□□□□ 0.42
SDHAF3Q9NRP4 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.67■□□□□ 0.42
SDHAF3Q9NRP4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.67■□□□□ 0.42
SDHAF3Q9NRP4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SDHAF3Q9NRP4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SDHAF3Q9NRP4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
SDHAF3Q9NRP4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SDHAF3Q9NRP4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.66■□□□□ 0.42
SDHAF3Q9NRP4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
SDHAF3Q9NRP4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SDHAF3Q9NRP4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SDHAF3Q9NRP4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SDHAF3Q9NRP4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SDHAF3Q9NRP4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SDHAF3Q9NRP4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SDHAF3Q9NRP4 FAM197Y1-201ENST00000421178 764 ntBASIC17.66■□□□□ 0.42
SDHAF3Q9NRP4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.66■□□□□ 0.42
SDHAF3Q9NRP4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.66■□□□□ 0.42
SDHAF3Q9NRP4 AC026271.3-201ENST00000571884 352 ntBASIC17.66■□□□□ 0.42
SDHAF3Q9NRP4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.66■□□□□ 0.42
SDHAF3Q9NRP4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.66■□□□□ 0.42
SDHAF3Q9NRP4 AC066615.1-201ENST00000640911 628 ntBASIC17.66■□□□□ 0.42
SDHAF3Q9NRP4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SDHAF3Q9NRP4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SDHAF3Q9NRP4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SDHAF3Q9NRP4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.66■□□□□ 0.42
SDHAF3Q9NRP4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SDHAF3Q9NRP4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SDHAF3Q9NRP4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SDHAF3Q9NRP4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.65■□□□□ 0.42
SDHAF3Q9NRP4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SDHAF3Q9NRP4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms