Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AC022417.1-201ENST00000624768 1303 ntBASIC4.08□□□□□ -1.76
KRTAP4-4Q9BYR3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
KRTAP4-4Q9BYR3 AL133464.1-204ENST00000634280 1094 ntTSL 5 BASIC4.08□□□□□ -1.76
KRTAP4-4Q9BYR3 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.08□□□□□ -1.76
KRTAP4-4Q9BYR3 AL160287.1-203ENST00000637960 1061 ntBASIC4.08□□□□□ -1.76
KRTAP4-4Q9BYR3 MFSD8-243ENST00000641695 1455 ntBASIC4.08□□□□□ -1.76
KRTAP4-4Q9BYR3 CASC19-264ENST00000641912 1184 ntBASIC4.08□□□□□ -1.76
KRTAP4-4Q9BYR3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
KRTAP4-4Q9BYR3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
KRTAP4-4Q9BYR3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
KRTAP4-4Q9BYR3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
KRTAP4-4Q9BYR3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
KRTAP4-4Q9BYR3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
KRTAP4-4Q9BYR3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 AL355852.1-201ENST00000454081 1771 ntBASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 AC004023.1-201ENST00000561473 1744 ntBASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 SPO11-202ENST00000371260 1608 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 KNSTRN-216ENST00000608100 1495 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 AC073429.2-201ENST00000569694 1444 ntBASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 NR1H5P-201ENST00000452683 1377 ntBASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 Y_RNA.813-201ENST00000364639 102 ntBASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 ADD3-AS1-201ENST00000369655 1147 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 RPL5-202ENST00000370321 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 HBD-202ENST00000380299 785 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 RANP7-201ENST00000418085 644 ntBASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 AC016907.1-201ENST00000419483 435 ntBASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 TAS2R2P-201ENST00000421146 910 ntBASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 ZNF863P-201ENST00000426746 417 ntBASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 SRD5A1P1-201ENST00000442297 786 ntBASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 AC073648.4-201ENST00000442655 781 ntBASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 AL606517.1-201ENST00000446914 387 ntBASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 AC234781.3-201ENST00000452540 973 ntBASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 AC004448.1-201ENST00000458332 883 ntBASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 AC105265.2-201ENST00000467189 838 ntBASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 RAP1BP2-201ENST00000478270 544 ntBASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 AC113398.2-201ENST00000507630 558 ntBASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 AC114812.3-201ENST00000509542 730 ntBASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 AC114940.1-201ENST00000512162 1265 ntBASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 SCARNA1-201ENST00000517138 166 ntBASIC4.07□□□□□ -1.76
KRTAP4-4Q9BYR3 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms