Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CCDC65Q8IXS2 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
CCDC65Q8IXS2 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC65Q8IXS2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC65Q8IXS2 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
CCDC65Q8IXS2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC65Q8IXS2 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC65Q8IXS2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC65Q8IXS2 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
CCDC65Q8IXS2 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC65Q8IXS2 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC65Q8IXS2 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.38■■□□□ 1.01
CCDC65Q8IXS2 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.38■■□□□ 1.01
CCDC65Q8IXS2 FAM197Y4-202ENST00000622692 608 ntBASIC21.38■■□□□ 1.01
CCDC65Q8IXS2 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC65Q8IXS2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC65Q8IXS2 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC65Q8IXS2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC65Q8IXS2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC65Q8IXS2 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC65Q8IXS2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
CCDC65Q8IXS2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC65Q8IXS2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC65Q8IXS2 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC65Q8IXS2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC65Q8IXS2 HTR7P1-201ENST00000538670 1336 ntBASIC21.37■■□□□ 1.01
CCDC65Q8IXS2 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC65Q8IXS2 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC65Q8IXS2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC65Q8IXS2 PRORSD1P-201ENST00000295112 541 ntBASIC21.37■■□□□ 1.01
CCDC65Q8IXS2 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC65Q8IXS2 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC65Q8IXS2 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.37■■□□□ 1.01
CCDC65Q8IXS2 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.37■■□□□ 1.01
CCDC65Q8IXS2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CCDC65Q8IXS2 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
CCDC65Q8IXS2 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.37■■□□□ 1.01
CCDC65Q8IXS2 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.37■■□□□ 1.01
CCDC65Q8IXS2 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CCDC65Q8IXS2 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC65Q8IXS2 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.37■■□□□ 1.01
CCDC65Q8IXS2 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC65Q8IXS2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.37■■□□□ 1.01
CCDC65Q8IXS2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC65Q8IXS2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC65Q8IXS2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC65Q8IXS2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CCDC65Q8IXS2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC65Q8IXS2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC65Q8IXS2 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC65Q8IXS2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC65Q8IXS2 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CCDC65Q8IXS2 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC65Q8IXS2 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.36■■□□□ 1.01
CCDC65Q8IXS2 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.36■■□□□ 1.01
CCDC65Q8IXS2 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.36■■□□□ 1.01
CCDC65Q8IXS2 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.36■■□□□ 1.01
CCDC65Q8IXS2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.36■■□□□ 1.01
CCDC65Q8IXS2 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC65Q8IXS2 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC65Q8IXS2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC65Q8IXS2 BX323043.1-201ENST00000641006 1765 ntBASIC21.36■■□□□ 1.01
CCDC65Q8IXS2 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC65Q8IXS2 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CCDC65Q8IXS2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC65Q8IXS2 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC65Q8IXS2 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CCDC65Q8IXS2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
CCDC65Q8IXS2 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC65Q8IXS2 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC65Q8IXS2 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CCDC65Q8IXS2 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.35■■□□□ 1.01
CCDC65Q8IXS2 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.35■■□□□ 1.01
CCDC65Q8IXS2 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.35■■□□□ 1.01
CCDC65Q8IXS2 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
CCDC65Q8IXS2 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.35■■□□□ 1.01
CCDC65Q8IXS2 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.35■■□□□ 1.01
CCDC65Q8IXS2 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC65Q8IXS2 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.35■■□□□ 1.01
CCDC65Q8IXS2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC65Q8IXS2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC65Q8IXS2 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC65Q8IXS2 AC018445.3-201ENST00000624177 1945 ntBASIC21.35■■□□□ 1.01
CCDC65Q8IXS2 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC65Q8IXS2 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC65Q8IXS2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC65Q8IXS2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC65Q8IXS2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC65Q8IXS2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC65Q8IXS2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.34■■□□□ 1.01
CCDC65Q8IXS2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CCDC65Q8IXS2 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.34■■□□□ 1.01
CCDC65Q8IXS2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC65Q8IXS2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.34■■□□□ 1.01
CCDC65Q8IXS2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC65Q8IXS2 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC65Q8IXS2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.34■■□□□ 1.01
CCDC65Q8IXS2 NIFKP9-201ENST00000419265 221 ntBASIC21.34■■□□□ 1.01
CCDC65Q8IXS2 AL353807.1-201ENST00000427475 662 ntBASIC21.34■■□□□ 1.01
CCDC65Q8IXS2 AP002982.1-201ENST00000492365 877 ntBASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms