Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
UBR1Q8IWV7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
UBR1Q8IWV7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
UBR1Q8IWV7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
UBR1Q8IWV7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC27.49■■□□□ 1.99
UBR1Q8IWV7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
UBR1Q8IWV7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC27.48■■□□□ 1.99
UBR1Q8IWV7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
UBR1Q8IWV7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
UBR1Q8IWV7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC27.48■■□□□ 1.99
UBR1Q8IWV7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC27.48■■□□□ 1.99
UBR1Q8IWV7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
UBR1Q8IWV7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
UBR1Q8IWV7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
UBR1Q8IWV7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
UBR1Q8IWV7 MRPL3P1-201ENST00000400109 1033 ntBASIC27.47■■□□□ 1.99
UBR1Q8IWV7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
UBR1Q8IWV7 AC120114.3-201ENST00000611923 658 ntBASIC27.47■■□□□ 1.99
UBR1Q8IWV7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC27.47■■□□□ 1.99
UBR1Q8IWV7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
UBR1Q8IWV7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC27.47■■□□□ 1.99
UBR1Q8IWV7 AP000593.1-201ENST00000393668 712 ntBASIC27.47■■□□□ 1.99
UBR1Q8IWV7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
UBR1Q8IWV7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC27.47■■□□□ 1.99
UBR1Q8IWV7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC27.47■■□□□ 1.99
UBR1Q8IWV7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
UBR1Q8IWV7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC27.47■■□□□ 1.99
UBR1Q8IWV7 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC27.46■■□□□ 1.99
UBR1Q8IWV7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
UBR1Q8IWV7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC27.46■■□□□ 1.99
UBR1Q8IWV7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC27.46■■□□□ 1.99
UBR1Q8IWV7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC27.46■■□□□ 1.99
UBR1Q8IWV7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC27.46■■□□□ 1.99
UBR1Q8IWV7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
UBR1Q8IWV7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
UBR1Q8IWV7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
UBR1Q8IWV7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC27.46■■□□□ 1.99
UBR1Q8IWV7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC27.46■■□□□ 1.99
UBR1Q8IWV7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC27.46■■□□□ 1.99
UBR1Q8IWV7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
UBR1Q8IWV7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC27.46■■□□□ 1.99
UBR1Q8IWV7 AL157888.1-201ENST00000631930 593 ntBASIC27.46■■□□□ 1.99
UBR1Q8IWV7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
UBR1Q8IWV7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
UBR1Q8IWV7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
UBR1Q8IWV7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC27.45■■□□□ 1.99
UBR1Q8IWV7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
UBR1Q8IWV7 PNN-202ENST00000553331 656 ntTSL 3 BASIC27.45■■□□□ 1.99
UBR1Q8IWV7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC27.45■■□□□ 1.99
UBR1Q8IWV7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.99
UBR1Q8IWV7 AC024243.1-201ENST00000609234 778 ntBASIC27.45■■□□□ 1.99
UBR1Q8IWV7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC27.45■■□□□ 1.99
UBR1Q8IWV7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC27.45■■□□□ 1.98
UBR1Q8IWV7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
UBR1Q8IWV7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
UBR1Q8IWV7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC27.45■■□□□ 1.98
UBR1Q8IWV7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.98
UBR1Q8IWV7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.98
UBR1Q8IWV7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC27.45■■□□□ 1.98
UBR1Q8IWV7 TOB2P1-201ENST00000469761 992 ntBASIC27.44■■□□□ 1.98
UBR1Q8IWV7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC27.44■■□□□ 1.98
UBR1Q8IWV7 RNF126P1-202ENST00000569893 925 ntBASIC27.44■■□□□ 1.98
UBR1Q8IWV7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC27.44■■□□□ 1.98
UBR1Q8IWV7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
UBR1Q8IWV7 GXYLT1P4-201ENST00000613576 1192 ntBASIC27.44■■□□□ 1.98
UBR1Q8IWV7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
UBR1Q8IWV7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC27.44■■□□□ 1.98
UBR1Q8IWV7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC27.44■■□□□ 1.98
UBR1Q8IWV7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
UBR1Q8IWV7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC27.44■■□□□ 1.98
UBR1Q8IWV7 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC27.44■■□□□ 1.98
UBR1Q8IWV7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC27.44■■□□□ 1.98
UBR1Q8IWV7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
UBR1Q8IWV7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC27.44■■□□□ 1.98
UBR1Q8IWV7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC27.44■■□□□ 1.98
UBR1Q8IWV7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC27.44■■□□□ 1.98
UBR1Q8IWV7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC27.44■■□□□ 1.98
UBR1Q8IWV7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC27.44■■□□□ 1.98
UBR1Q8IWV7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC27.44■■□□□ 1.98
UBR1Q8IWV7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
UBR1Q8IWV7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
UBR1Q8IWV7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
UBR1Q8IWV7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC27.43■■□□□ 1.98
UBR1Q8IWV7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
UBR1Q8IWV7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
UBR1Q8IWV7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
UBR1Q8IWV7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
UBR1Q8IWV7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
UBR1Q8IWV7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC27.43■■□□□ 1.98
UBR1Q8IWV7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC27.43■■□□□ 1.98
UBR1Q8IWV7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC27.43■■□□□ 1.98
UBR1Q8IWV7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC27.43■■□□□ 1.98
UBR1Q8IWV7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC27.43■■□□□ 1.98
UBR1Q8IWV7 AL136038.4-201ENST00000603606 1261 ntBASIC27.43■■□□□ 1.98
UBR1Q8IWV7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC27.43■■□□□ 1.98
UBR1Q8IWV7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
UBR1Q8IWV7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
UBR1Q8IWV7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
UBR1Q8IWV7 GOLGA2P11-201ENST00000562660 1621 ntBASIC27.43■■□□□ 1.98
UBR1Q8IWV7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms