Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh19Q80TF3 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh19Q80TF3 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Pcdh19Q80TF3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh19Q80TF3 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh19Q80TF3 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Pcdh19Q80TF3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh19Q80TF3 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh19Q80TF3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pcdh19Q80TF3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh19Q80TF3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh19Q80TF3 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh19Q80TF3 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh19Q80TF3 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh19Q80TF3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh19Q80TF3 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh19Q80TF3 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Pcdh19Q80TF3 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pcdh19Q80TF3 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh19Q80TF3 Rprl3-201ENSMUST00000157400 290 ntBASIC16.13■□□□□ 0.17
Pcdh19Q80TF3 Gm44430-201ENSMUST00000203376 995 ntBASIC16.13■□□□□ 0.17
Pcdh19Q80TF3 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdh19Q80TF3 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh19Q80TF3 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Pcdh19Q80TF3 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh19Q80TF3 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pcdh19Q80TF3 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh19Q80TF3 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh19Q80TF3 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh19Q80TF3 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pcdh19Q80TF3 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh19Q80TF3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh19Q80TF3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh19Q80TF3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh19Q80TF3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh19Q80TF3 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdh19Q80TF3 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh19Q80TF3 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh19Q80TF3 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.12■□□□□ 0.17
Pcdh19Q80TF3 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.12■□□□□ 0.17
Pcdh19Q80TF3 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh19Q80TF3 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.12■□□□□ 0.17
Pcdh19Q80TF3 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.12■□□□□ 0.17
Pcdh19Q80TF3 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh19Q80TF3 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Pcdh19Q80TF3 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh19Q80TF3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh19Q80TF3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdh19Q80TF3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh19Q80TF3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh19Q80TF3 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh19Q80TF3 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pcdh19Q80TF3 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh19Q80TF3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh19Q80TF3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh19Q80TF3 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh19Q80TF3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh19Q80TF3 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh19Q80TF3 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh19Q80TF3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh19Q80TF3 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh19Q80TF3 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdh19Q80TF3 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh19Q80TF3 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh19Q80TF3 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh19Q80TF3 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdh19Q80TF3 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdh19Q80TF3 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Pcdh19Q80TF3 Gm24589-201ENSMUST00000116692 94 ntBASIC16.11■□□□□ 0.17
Pcdh19Q80TF3 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdh19Q80TF3 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh19Q80TF3 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdh19Q80TF3 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdh19Q80TF3 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh19Q80TF3 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh19Q80TF3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.11■□□□□ 0.17
Pcdh19Q80TF3 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh19Q80TF3 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh19Q80TF3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Pcdh19Q80TF3 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh19Q80TF3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh19Q80TF3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh19Q80TF3 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdh19Q80TF3 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.1■□□□□ 0.17
Pcdh19Q80TF3 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh19Q80TF3 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh19Q80TF3 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh19Q80TF3 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh19Q80TF3 Gm12895-201ENSMUST00000122214 226 ntBASIC16.1■□□□□ 0.17
Pcdh19Q80TF3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh19Q80TF3 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh19Q80TF3 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdh19Q80TF3 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.1■□□□□ 0.17
Pcdh19Q80TF3 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Pcdh19Q80TF3 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh19Q80TF3 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh19Q80TF3 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdh19Q80TF3 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh19Q80TF3 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh19Q80TF3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms