Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDHR3Q6ZTQ4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDHR3Q6ZTQ4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.34■□□□□ 0.69
CDHR3Q6ZTQ4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDHR3Q6ZTQ4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDHR3Q6ZTQ4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDHR3Q6ZTQ4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDHR3Q6ZTQ4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDHR3Q6ZTQ4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CDHR3Q6ZTQ4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDHR3Q6ZTQ4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CDHR3Q6ZTQ4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CDHR3Q6ZTQ4 AC026471.1-201ENST00000564629 3026 ntBASIC19.33■□□□□ 0.69
CDHR3Q6ZTQ4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.33■□□□□ 0.69
CDHR3Q6ZTQ4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDHR3Q6ZTQ4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.33■□□□□ 0.69
CDHR3Q6ZTQ4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDHR3Q6ZTQ4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.33■□□□□ 0.69
CDHR3Q6ZTQ4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDHR3Q6ZTQ4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.33■□□□□ 0.68
CDHR3Q6ZTQ4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CDHR3Q6ZTQ4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CDHR3Q6ZTQ4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.33■□□□□ 0.68
CDHR3Q6ZTQ4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.33■□□□□ 0.68
CDHR3Q6ZTQ4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.33■□□□□ 0.68
CDHR3Q6ZTQ4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
CDHR3Q6ZTQ4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDHR3Q6ZTQ4 AC005829.2-201ENST00000571422 1056 ntBASIC19.33■□□□□ 0.68
CDHR3Q6ZTQ4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.33■□□□□ 0.68
CDHR3Q6ZTQ4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.33■□□□□ 0.68
CDHR3Q6ZTQ4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.33■□□□□ 0.68
CDHR3Q6ZTQ4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.33■□□□□ 0.68
CDHR3Q6ZTQ4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDHR3Q6ZTQ4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDHR3Q6ZTQ4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDHR3Q6ZTQ4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.33■□□□□ 0.68
CDHR3Q6ZTQ4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.33■□□□□ 0.68
CDHR3Q6ZTQ4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDHR3Q6ZTQ4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDHR3Q6ZTQ4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.33■□□□□ 0.68
CDHR3Q6ZTQ4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDHR3Q6ZTQ4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDHR3Q6ZTQ4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDHR3Q6ZTQ4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
CDHR3Q6ZTQ4 AC005082.1-201ENST00000413042 2259 ntBASIC19.32■□□□□ 0.68
CDHR3Q6ZTQ4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CDHR3Q6ZTQ4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDHR3Q6ZTQ4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDHR3Q6ZTQ4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDHR3Q6ZTQ4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDHR3Q6ZTQ4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.32■□□□□ 0.68
CDHR3Q6ZTQ4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.32■□□□□ 0.68
CDHR3Q6ZTQ4 AC098590.1-201ENST00000468126 897 ntBASIC19.32■□□□□ 0.68
CDHR3Q6ZTQ4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.32■□□□□ 0.68
CDHR3Q6ZTQ4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDHR3Q6ZTQ4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDHR3Q6ZTQ4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDHR3Q6ZTQ4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDHR3Q6ZTQ4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDHR3Q6ZTQ4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CDHR3Q6ZTQ4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CDHR3Q6ZTQ4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDHR3Q6ZTQ4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDHR3Q6ZTQ4 TFP1-202ENST00000475455 1573 ntBASIC19.32■□□□□ 0.68
CDHR3Q6ZTQ4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.31■□□□□ 0.68
CDHR3Q6ZTQ4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDHR3Q6ZTQ4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDHR3Q6ZTQ4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDHR3Q6ZTQ4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDHR3Q6ZTQ4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDHR3Q6ZTQ4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDHR3Q6ZTQ4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDHR3Q6ZTQ4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDHR3Q6ZTQ4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.31■□□□□ 0.68
CDHR3Q6ZTQ4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CDHR3Q6ZTQ4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDHR3Q6ZTQ4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDHR3Q6ZTQ4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDHR3Q6ZTQ4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.31■□□□□ 0.68
CDHR3Q6ZTQ4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.31■□□□□ 0.68
CDHR3Q6ZTQ4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.31■□□□□ 0.68
CDHR3Q6ZTQ4 AC006557.6-201ENST00000623071 864 ntBASIC19.31■□□□□ 0.68
CDHR3Q6ZTQ4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.31■□□□□ 0.68
CDHR3Q6ZTQ4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDHR3Q6ZTQ4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDHR3Q6ZTQ4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.31■□□□□ 0.68
CDHR3Q6ZTQ4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CDHR3Q6ZTQ4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CDHR3Q6ZTQ4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDHR3Q6ZTQ4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 FP475955.4-201ENST00000623131 1990 ntBASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDHR3Q6ZTQ4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms