Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PEX3P56589 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.25■□□□□ 0.99
PEX3P56589 AC091390.4-202ENST00000476426 537 ntBASIC21.25■□□□□ 0.99
PEX3P56589 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.25■□□□□ 0.99
PEX3P56589 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.25■□□□□ 0.99
PEX3P56589 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
PEX3P56589 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.25■□□□□ 0.99
PEX3P56589 AC130371.2-201ENST00000619443 611 ntBASIC21.25■□□□□ 0.99
PEX3P56589 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
PEX3P56589 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PEX3P56589 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.25■□□□□ 0.99
PEX3P56589 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.25■□□□□ 0.99
PEX3P56589 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.25■□□□□ 0.99
PEX3P56589 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PEX3P56589 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PEX3P56589 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.24■□□□□ 0.99
PEX3P56589 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PEX3P56589 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PEX3P56589 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PEX3P56589 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PEX3P56589 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.24■□□□□ 0.99
PEX3P56589 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PEX3P56589 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PEX3P56589 RBM17P1-201ENST00000453646 1190 ntBASIC21.24■□□□□ 0.99
PEX3P56589 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.24■□□□□ 0.99
PEX3P56589 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.24■□□□□ 0.99
PEX3P56589 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.24■□□□□ 0.99
PEX3P56589 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.24■□□□□ 0.99
PEX3P56589 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.24■□□□□ 0.99
PEX3P56589 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PEX3P56589 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PEX3P56589 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PEX3P56589 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
PEX3P56589 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.24■□□□□ 0.99
PEX3P56589 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PEX3P56589 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PEX3P56589 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
PEX3P56589 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PEX3P56589 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PEX3P56589 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PEX3P56589 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PEX3P56589 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PEX3P56589 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PEX3P56589 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PEX3P56589 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.23■□□□□ 0.99
PEX3P56589 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
PEX3P56589 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.23■□□□□ 0.99
PEX3P56589 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PEX3P56589 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.23■□□□□ 0.99
PEX3P56589 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.23■□□□□ 0.99
PEX3P56589 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.23■□□□□ 0.99
PEX3P56589 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.23■□□□□ 0.99
PEX3P56589 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.23■□□□□ 0.99
PEX3P56589 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.23■□□□□ 0.99
PEX3P56589 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.22■□□□□ 0.99
PEX3P56589 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
PEX3P56589 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.22■□□□□ 0.99
PEX3P56589 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PEX3P56589 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PEX3P56589 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PEX3P56589 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.22■□□□□ 0.99
PEX3P56589 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.22■□□□□ 0.99
PEX3P56589 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
PEX3P56589 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
PEX3P56589 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PEX3P56589 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PEX3P56589 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.22■□□□□ 0.99
PEX3P56589 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PEX3P56589 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.21■□□□□ 0.99
PEX3P56589 AC079598.2-202ENST00000546624 1451 ntBASIC21.21■□□□□ 0.99
PEX3P56589 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PEX3P56589 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PEX3P56589 UNC93B2-201ENST00000285383 730 ntBASIC21.21■□□□□ 0.99
PEX3P56589 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
PEX3P56589 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.21■□□□□ 0.99
PEX3P56589 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PEX3P56589 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PEX3P56589 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.21■□□□□ 0.99
PEX3P56589 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PEX3P56589 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
PEX3P56589 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PEX3P56589 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PEX3P56589 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
PEX3P56589 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PEX3P56589 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
PEX3P56589 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
PEX3P56589 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
PEX3P56589 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.2■□□□□ 0.98
PEX3P56589 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
PEX3P56589 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PEX3P56589 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.2■□□□□ 0.98
PEX3P56589 FAM207BP-201ENST00000447172 505 ntBASIC21.2■□□□□ 0.98
PEX3P56589 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PEX3P56589 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.2■□□□□ 0.98
PEX3P56589 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PEX3P56589 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.2■□□□□ 0.98
PEX3P56589 AP000525.1-201ENST00000608286 694 ntBASIC21.2■□□□□ 0.98
PEX3P56589 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.2■□□□□ 0.98
PEX3P56589 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PEX3P56589 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms