Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HCFC1P51610 HBZP1-201ENST00000354915 429 ntBASIC16.81■□□□□ 0.28
HCFC1P51610 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.81■□□□□ 0.28
HCFC1P51610 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.81■□□□□ 0.28
HCFC1P51610 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HCFC1P51610 CKBP1-201ENST00000565489 1086 ntBASIC16.81■□□□□ 0.28
HCFC1P51610 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.81■□□□□ 0.28
HCFC1P51610 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HCFC1P51610 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.81■□□□□ 0.28
HCFC1P51610 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HCFC1P51610 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HCFC1P51610 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HCFC1P51610 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HCFC1P51610 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HCFC1P51610 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HCFC1P51610 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HCFC1P51610 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.81■□□□□ 0.28
HCFC1P51610 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HCFC1P51610 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HCFC1P51610 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HCFC1P51610 TPM4P1-201ENST00000436100 807 ntBASIC16.8■□□□□ 0.28
HCFC1P51610 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.8■□□□□ 0.28
HCFC1P51610 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.8■□□□□ 0.28
HCFC1P51610 PRSS44-201ENST00000515154 1146 ntBASIC16.8■□□□□ 0.28
HCFC1P51610 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HCFC1P51610 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
HCFC1P51610 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HCFC1P51610 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HCFC1P51610 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HCFC1P51610 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HCFC1P51610 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HCFC1P51610 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HCFC1P51610 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.8■□□□□ 0.28
HCFC1P51610 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HCFC1P51610 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
HCFC1P51610 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HCFC1P51610 KRT8P45-201ENST00000414328 1447 ntBASIC16.8■□□□□ 0.28
HCFC1P51610 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HCFC1P51610 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HCFC1P51610 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HCFC1P51610 TSPY21P-201ENST00000433481 731 ntBASIC16.8■□□□□ 0.28
HCFC1P51610 TSPY23P-201ENST00000440136 739 ntBASIC16.8■□□□□ 0.28
HCFC1P51610 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.8■□□□□ 0.28
HCFC1P51610 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.8■□□□□ 0.28
HCFC1P51610 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.8■□□□□ 0.28
HCFC1P51610 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HCFC1P51610 HYMAI.1-201ENST00000620949 238 ntBASIC16.8■□□□□ 0.28
HCFC1P51610 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HCFC1P51610 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HCFC1P51610 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HCFC1P51610 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.8■□□□□ 0.28
HCFC1P51610 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HCFC1P51610 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
HCFC1P51610 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HCFC1P51610 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC1P51610 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC1P51610 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC1P51610 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC1P51610 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC1P51610 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC1P51610 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.79■□□□□ 0.28
HCFC1P51610 VENTXP5-201ENST00000523979 775 ntBASIC16.79■□□□□ 0.28
HCFC1P51610 CLEC4GP1-201ENST00000596555 870 ntBASIC16.79■□□□□ 0.28
HCFC1P51610 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.79■□□□□ 0.28
HCFC1P51610 GABARAPL3-202ENST00000624044 1851 ntBASIC16.79■□□□□ 0.28
HCFC1P51610 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.79■□□□□ 0.28
HCFC1P51610 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC1P51610 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC1P51610 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.79■□□□□ 0.28
HCFC1P51610 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC1P51610 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC1P51610 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC1P51610 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC1P51610 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC1P51610 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.79■□□□□ 0.28
HCFC1P51610 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC1P51610 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HCFC1P51610 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.79■□□□□ 0.28
HCFC1P51610 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.79■□□□□ 0.28
HCFC1P51610 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC1P51610 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC1P51610 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC1P51610 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HCFC1P51610 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HCFC1P51610 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HCFC1P51610 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
HCFC1P51610 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC1P51610 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC1P51610 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC1P51610 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC1P51610 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC1P51610 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.78■□□□□ 0.28
HCFC1P51610 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.78■□□□□ 0.28
HCFC1P51610 AC012313.10-201ENST00000623509 926 ntBASIC16.78■□□□□ 0.28
HCFC1P51610 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC1P51610 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.78■□□□□ 0.28
HCFC1P51610 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC1P51610 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HCFC1P51610 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC1P51610 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms