Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.65■□□□□ 0.74
FDFT1P37268 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
FDFT1P37268 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FDFT1P37268 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FDFT1P37268 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
FDFT1P37268 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.65■□□□□ 0.74
FDFT1P37268 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FDFT1P37268 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
FDFT1P37268 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
FDFT1P37268 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
FDFT1P37268 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
FDFT1P37268 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
FDFT1P37268 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
FDFT1P37268 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
FDFT1P37268 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FDFT1P37268 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.64■□□□□ 0.73
FDFT1P37268 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FDFT1P37268 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FDFT1P37268 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
FDFT1P37268 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
FDFT1P37268 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
FDFT1P37268 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.64■□□□□ 0.73
FDFT1P37268 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.64■□□□□ 0.73
FDFT1P37268 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
FDFT1P37268 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.64■□□□□ 0.73
FDFT1P37268 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FDFT1P37268 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
FDFT1P37268 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
FDFT1P37268 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FDFT1P37268 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FDFT1P37268 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
FDFT1P37268 AC093503.3-201ENST00000624917 2352 ntBASIC19.64■□□□□ 0.73
FDFT1P37268 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
FDFT1P37268 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FDFT1P37268 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.63■□□□□ 0.73
FDFT1P37268 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
FDFT1P37268 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FDFT1P37268 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
FDFT1P37268 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.63■□□□□ 0.73
FDFT1P37268 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
FDFT1P37268 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
FDFT1P37268 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
FDFT1P37268 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.63■□□□□ 0.73
FDFT1P37268 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.63■□□□□ 0.73
FDFT1P37268 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FDFT1P37268 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.63■□□□□ 0.73
FDFT1P37268 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.63■□□□□ 0.73
FDFT1P37268 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
FDFT1P37268 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FDFT1P37268 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.63■□□□□ 0.73
FDFT1P37268 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.63■□□□□ 0.73
FDFT1P37268 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FDFT1P37268 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FDFT1P37268 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.63■□□□□ 0.73
FDFT1P37268 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FDFT1P37268 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.63■□□□□ 0.73
FDFT1P37268 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.63■□□□□ 0.73
FDFT1P37268 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.63■□□□□ 0.73
FDFT1P37268 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.63■□□□□ 0.73
FDFT1P37268 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.63■□□□□ 0.73
FDFT1P37268 AC008403.3-201ENST00000598924 454 ntBASIC19.63■□□□□ 0.73
FDFT1P37268 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
FDFT1P37268 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FDFT1P37268 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
FDFT1P37268 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.63■□□□□ 0.73
FDFT1P37268 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FDFT1P37268 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FDFT1P37268 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
FDFT1P37268 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FDFT1P37268 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
FDFT1P37268 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
FDFT1P37268 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FDFT1P37268 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FDFT1P37268 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
FDFT1P37268 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
FDFT1P37268 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.62■□□□□ 0.73
FDFT1P37268 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FDFT1P37268 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FDFT1P37268 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.62■□□□□ 0.73
FDFT1P37268 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.62■□□□□ 0.73
FDFT1P37268 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.62■□□□□ 0.73
FDFT1P37268 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FDFT1P37268 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.62■□□□□ 0.73
FDFT1P37268 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FDFT1P37268 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
FDFT1P37268 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.62■□□□□ 0.73
FDFT1P37268 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.62■□□□□ 0.73
FDFT1P37268 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
FDFT1P37268 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FDFT1P37268 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.62■□□□□ 0.73
FDFT1P37268 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FDFT1P37268 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.62■□□□□ 0.73
FDFT1P37268 AL049812.1-201ENST00000432563 2267 ntBASIC19.62■□□□□ 0.73
FDFT1P37268 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FDFT1P37268 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
FDFT1P37268 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
FDFT1P37268 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.61■□□□□ 0.73
FDFT1P37268 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FDFT1P37268 NBPF21P-201ENST00000425093 1451 ntBASIC19.61■□□□□ 0.73
FDFT1P37268 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms