Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.33■□□□□ 0.84
CTNNA1P35221 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CTNNA1P35221 CROCCP3-202ENST00000420820 1947 ntBASIC20.33■□□□□ 0.84
CTNNA1P35221 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CTNNA1P35221 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CTNNA1P35221 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CTNNA1P35221 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CTNNA1P35221 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
CTNNA1P35221 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CTNNA1P35221 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
CTNNA1P35221 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTNNA1P35221 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.32■□□□□ 0.84
CTNNA1P35221 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CTNNA1P35221 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.32■□□□□ 0.84
CTNNA1P35221 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CTNNA1P35221 AC006970.2-201ENST00000450065 779 ntBASIC20.32■□□□□ 0.84
CTNNA1P35221 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.32■□□□□ 0.84
CTNNA1P35221 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CTNNA1P35221 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.32■□□□□ 0.84
CTNNA1P35221 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CTNNA1P35221 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
CTNNA1P35221 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTNNA1P35221 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CTNNA1P35221 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CTNNA1P35221 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CTNNA1P35221 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
CTNNA1P35221 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
CTNNA1P35221 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.31■□□□□ 0.84
CTNNA1P35221 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.31■□□□□ 0.84
CTNNA1P35221 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CTNNA1P35221 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.31■□□□□ 0.84
CTNNA1P35221 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.31■□□□□ 0.84
CTNNA1P35221 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTNNA1P35221 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTNNA1P35221 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CTNNA1P35221 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CTNNA1P35221 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CTNNA1P35221 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.31■□□□□ 0.84
CTNNA1P35221 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.31■□□□□ 0.84
CTNNA1P35221 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.31■□□□□ 0.84
CTNNA1P35221 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTNNA1P35221 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTNNA1P35221 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTNNA1P35221 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTNNA1P35221 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTNNA1P35221 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CTNNA1P35221 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CTNNA1P35221 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTNNA1P35221 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTNNA1P35221 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTNNA1P35221 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CTNNA1P35221 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
CTNNA1P35221 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTNNA1P35221 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTNNA1P35221 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTNNA1P35221 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTNNA1P35221 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.3■□□□□ 0.84
CTNNA1P35221 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTNNA1P35221 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
CTNNA1P35221 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTNNA1P35221 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTNNA1P35221 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.3■□□□□ 0.84
CTNNA1P35221 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.3■□□□□ 0.84
CTNNA1P35221 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTNNA1P35221 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.3■□□□□ 0.84
CTNNA1P35221 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTNNA1P35221 AC104417.2-201ENST00000562989 1793 ntBASIC20.3■□□□□ 0.84
CTNNA1P35221 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTNNA1P35221 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTNNA1P35221 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.3■□□□□ 0.84
CTNNA1P35221 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
CTNNA1P35221 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTNNA1P35221 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CTNNA1P35221 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTNNA1P35221 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTNNA1P35221 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTNNA1P35221 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CTNNA1P35221 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTNNA1P35221 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CTNNA1P35221 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTNNA1P35221 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CTNNA1P35221 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTNNA1P35221 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTNNA1P35221 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTNNA1P35221 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.29■□□□□ 0.84
CTNNA1P35221 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CTNNA1P35221 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTNNA1P35221 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTNNA1P35221 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.29■□□□□ 0.84
CTNNA1P35221 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTNNA1P35221 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTNNA1P35221 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTNNA1P35221 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.29■□□□□ 0.84
CTNNA1P35221 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.29■□□□□ 0.84
CTNNA1P35221 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.29■□□□□ 0.84
CTNNA1P35221 AL121906.2-201ENST00000621597 723 ntBASIC20.29■□□□□ 0.84
CTNNA1P35221 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.29■□□□□ 0.84
CTNNA1P35221 MYC-209ENST00000641252 345 ntBASIC20.29■□□□□ 0.84
CTNNA1P35221 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CTNNA1P35221 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms