Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CSB-PGBD3P0DP91 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC25.56■■□□□ 1.68
CSB-PGBD3P0DP91 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CSB-PGBD3P0DP91 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CSB-PGBD3P0DP91 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
CSB-PGBD3P0DP91 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
CSB-PGBD3P0DP91 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC25.55■■□□□ 1.68
CSB-PGBD3P0DP91 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
CSB-PGBD3P0DP91 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CSB-PGBD3P0DP91 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
CSB-PGBD3P0DP91 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CSB-PGBD3P0DP91 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC25.55■■□□□ 1.68
CSB-PGBD3P0DP91 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC25.55■■□□□ 1.68
CSB-PGBD3P0DP91 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CSB-PGBD3P0DP91 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CSB-PGBD3P0DP91 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC25.55■■□□□ 1.68
CSB-PGBD3P0DP91 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CSB-PGBD3P0DP91 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
CSB-PGBD3P0DP91 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
CSB-PGBD3P0DP91 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CSB-PGBD3P0DP91 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CSB-PGBD3P0DP91 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CSB-PGBD3P0DP91 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CSB-PGBD3P0DP91 SPDYE13P-201ENST00000445314 798 ntBASIC25.54■■□□□ 1.68
CSB-PGBD3P0DP91 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC25.54■■□□□ 1.68
CSB-PGBD3P0DP91 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CSB-PGBD3P0DP91 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC25.54■■□□□ 1.68
CSB-PGBD3P0DP91 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CSB-PGBD3P0DP91 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
CSB-PGBD3P0DP91 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
CSB-PGBD3P0DP91 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
CSB-PGBD3P0DP91 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CSB-PGBD3P0DP91 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CSB-PGBD3P0DP91 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CSB-PGBD3P0DP91 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC25.53■■□□□ 1.68
CSB-PGBD3P0DP91 ANKRD18DP-204ENST00000455355 1975 ntBASIC25.53■■□□□ 1.68
CSB-PGBD3P0DP91 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
CSB-PGBD3P0DP91 TBC1D3P2-202ENST00000577902 1649 ntBASIC25.53■■□□□ 1.68
CSB-PGBD3P0DP91 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CSB-PGBD3P0DP91 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CSB-PGBD3P0DP91 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
CSB-PGBD3P0DP91 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC25.53■■□□□ 1.68
CSB-PGBD3P0DP91 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
CSB-PGBD3P0DP91 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CSB-PGBD3P0DP91 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CSB-PGBD3P0DP91 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC25.53■■□□□ 1.68
CSB-PGBD3P0DP91 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
CSB-PGBD3P0DP91 AC020907.5-201ENST00000624372 1936 ntBASIC25.53■■□□□ 1.68
CSB-PGBD3P0DP91 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC25.52■■□□□ 1.68
CSB-PGBD3P0DP91 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CSB-PGBD3P0DP91 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC25.52■■□□□ 1.68
CSB-PGBD3P0DP91 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC25.52■■□□□ 1.68
CSB-PGBD3P0DP91 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC25.52■■□□□ 1.68
CSB-PGBD3P0DP91 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
CSB-PGBD3P0DP91 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC25.52■■□□□ 1.68
CSB-PGBD3P0DP91 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
CSB-PGBD3P0DP91 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CSB-PGBD3P0DP91 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC25.52■■□□□ 1.68
CSB-PGBD3P0DP91 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CSB-PGBD3P0DP91 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CSB-PGBD3P0DP91 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC25.52■■□□□ 1.68
CSB-PGBD3P0DP91 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CSB-PGBD3P0DP91 TSPY21P-201ENST00000433481 731 ntBASIC25.52■■□□□ 1.68
CSB-PGBD3P0DP91 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CSB-PGBD3P0DP91 TSPY23P-201ENST00000440136 739 ntBASIC25.52■■□□□ 1.68
CSB-PGBD3P0DP91 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC25.52■■□□□ 1.68
CSB-PGBD3P0DP91 CNP-204ENST00000472031 1019 ntTSL 2 BASIC25.52■■□□□ 1.68
CSB-PGBD3P0DP91 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
CSB-PGBD3P0DP91 CR769767.2-201ENST00000622735 460 ntBASIC25.52■■□□□ 1.68
CSB-PGBD3P0DP91 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC25.52■■□□□ 1.68
CSB-PGBD3P0DP91 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CSB-PGBD3P0DP91 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CSB-PGBD3P0DP91 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CSB-PGBD3P0DP91 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
CSB-PGBD3P0DP91 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CSB-PGBD3P0DP91 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CSB-PGBD3P0DP91 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CSB-PGBD3P0DP91 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC25.51■■□□□ 1.67
CSB-PGBD3P0DP91 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC25.51■■□□□ 1.67
CSB-PGBD3P0DP91 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
CSB-PGBD3P0DP91 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CSB-PGBD3P0DP91 NPAP1P7-201ENST00000613027 823 ntBASIC25.51■■□□□ 1.67
CSB-PGBD3P0DP91 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CSB-PGBD3P0DP91 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC25.51■■□□□ 1.67
CSB-PGBD3P0DP91 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC25.51■■□□□ 1.67
CSB-PGBD3P0DP91 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CSB-PGBD3P0DP91 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CSB-PGBD3P0DP91 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CSB-PGBD3P0DP91 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CSB-PGBD3P0DP91 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CSB-PGBD3P0DP91 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CSB-PGBD3P0DP91 HBZP1-201ENST00000354915 429 ntBASIC25.5■■□□□ 1.67
CSB-PGBD3P0DP91 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CSB-PGBD3P0DP91 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
CSB-PGBD3P0DP91 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CSB-PGBD3P0DP91 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC25.5■■□□□ 1.67
CSB-PGBD3P0DP91 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC25.5■■□□□ 1.67
CSB-PGBD3P0DP91 AL645929.1-201ENST00000420084 975 ntBASIC25.5■■□□□ 1.67
CSB-PGBD3P0DP91 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC25.5■■□□□ 1.67
CSB-PGBD3P0DP91 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC25.5■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms