Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GGPS1O95749 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
GGPS1O95749 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GGPS1O95749 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
GGPS1O95749 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.65■■□□□ 1.06
GGPS1O95749 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.65■■□□□ 1.06
GGPS1O95749 AC010653.2-201ENST00000623505 997 ntBASIC21.65■■□□□ 1.06
GGPS1O95749 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GGPS1O95749 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GGPS1O95749 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GGPS1O95749 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GGPS1O95749 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
GGPS1O95749 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GGPS1O95749 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
GGPS1O95749 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
GGPS1O95749 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
GGPS1O95749 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
GGPS1O95749 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
GGPS1O95749 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
GGPS1O95749 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
GGPS1O95749 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
GGPS1O95749 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
GGPS1O95749 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GGPS1O95749 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.64■■□□□ 1.05
GGPS1O95749 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GGPS1O95749 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.64■■□□□ 1.05
GGPS1O95749 NTF6B-201ENST00000591913 560 ntBASIC21.64■■□□□ 1.05
GGPS1O95749 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GGPS1O95749 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.64■■□□□ 1.05
GGPS1O95749 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
GGPS1O95749 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.64■■□□□ 1.05
GGPS1O95749 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.64■■□□□ 1.05
GGPS1O95749 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.64■■□□□ 1.05
GGPS1O95749 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
GGPS1O95749 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.64■■□□□ 1.05
GGPS1O95749 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
GGPS1O95749 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.63■■□□□ 1.05
GGPS1O95749 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
GGPS1O95749 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
GGPS1O95749 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.63■■□□□ 1.05
GGPS1O95749 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
GGPS1O95749 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
GGPS1O95749 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
GGPS1O95749 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.63■■□□□ 1.05
GGPS1O95749 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
GGPS1O95749 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GGPS1O95749 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.63■■□□□ 1.05
GGPS1O95749 BX664615.1-201ENST00000443558 458 ntBASIC21.63■■□□□ 1.05
GGPS1O95749 TSPY17P-201ENST00000450329 467 ntBASIC21.63■■□□□ 1.05
GGPS1O95749 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.63■■□□□ 1.05
GGPS1O95749 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GGPS1O95749 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
GGPS1O95749 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.63■■□□□ 1.05
GGPS1O95749 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
GGPS1O95749 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.63■■□□□ 1.05
GGPS1O95749 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.63■■□□□ 1.05
GGPS1O95749 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
GGPS1O95749 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
GGPS1O95749 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
GGPS1O95749 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GGPS1O95749 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.62■■□□□ 1.05
GGPS1O95749 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GGPS1O95749 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.62■■□□□ 1.05
GGPS1O95749 CA15P1-201ENST00000481698 905 ntBASIC21.62■■□□□ 1.05
GGPS1O95749 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
GGPS1O95749 AL353719.1-201ENST00000566847 864 ntBASIC21.62■■□□□ 1.05
GGPS1O95749 WWOX-216ENST00000569818 525 ntBASIC21.62■■□□□ 1.05
GGPS1O95749 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.62■■□□□ 1.05
GGPS1O95749 AL138966.2-201ENST00000621997 464 ntBASIC21.62■■□□□ 1.05
GGPS1O95749 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
GGPS1O95749 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
GGPS1O95749 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
GGPS1O95749 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
GGPS1O95749 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
GGPS1O95749 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.62■■□□□ 1.05
GGPS1O95749 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GGPS1O95749 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.62■■□□□ 1.05
GGPS1O95749 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.62■■□□□ 1.05
GGPS1O95749 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
GGPS1O95749 KRT8P11-201ENST00000409686 1436 ntBASIC21.62■■□□□ 1.05
GGPS1O95749 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.62■■□□□ 1.05
GGPS1O95749 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
GGPS1O95749 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.62■■□□□ 1.05
GGPS1O95749 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GGPS1O95749 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GGPS1O95749 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GGPS1O95749 AK4P3-201ENST00000418260 669 ntBASIC21.61■■□□□ 1.05
GGPS1O95749 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.61■■□□□ 1.05
GGPS1O95749 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.61■■□□□ 1.05
GGPS1O95749 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GGPS1O95749 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GGPS1O95749 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.61■■□□□ 1.05
GGPS1O95749 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
GGPS1O95749 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GGPS1O95749 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
GGPS1O95749 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GGPS1O95749 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.6■■□□□ 1.05
GGPS1O95749 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.6■■□□□ 1.05
GGPS1O95749 AC117947.1-201ENST00000427448 529 ntBASIC21.6■■□□□ 1.05
GGPS1O95749 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms