Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SPDYE4A6NLX3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SPDYE4A6NLX3 AC239809.2-201ENST00000415381 517 ntBASIC21.64■■□□□ 1.05
SPDYE4A6NLX3 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SPDYE4A6NLX3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SPDYE4A6NLX3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.64■■□□□ 1.05
SPDYE4A6NLX3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SPDYE4A6NLX3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.64■■□□□ 1.05
SPDYE4A6NLX3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
SPDYE4A6NLX3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.64■■□□□ 1.05
SPDYE4A6NLX3 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.64■■□□□ 1.05
SPDYE4A6NLX3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.64■■□□□ 1.05
SPDYE4A6NLX3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SPDYE4A6NLX3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SPDYE4A6NLX3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SPDYE4A6NLX3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SPDYE4A6NLX3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SPDYE4A6NLX3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
SPDYE4A6NLX3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPDYE4A6NLX3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SPDYE4A6NLX3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPDYE4A6NLX3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SPDYE4A6NLX3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPDYE4A6NLX3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC21.63■■□□□ 1.05
SPDYE4A6NLX3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SPDYE4A6NLX3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.63■■□□□ 1.05
SPDYE4A6NLX3 AC012313.1-201ENST00000593393 3059 ntBASIC21.63■■□□□ 1.05
SPDYE4A6NLX3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
SPDYE4A6NLX3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SPDYE4A6NLX3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPDYE4A6NLX3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SPDYE4A6NLX3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPDYE4A6NLX3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPDYE4A6NLX3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.63■■□□□ 1.05
SPDYE4A6NLX3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SPDYE4A6NLX3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.63■■□□□ 1.05
SPDYE4A6NLX3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPDYE4A6NLX3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.63■■□□□ 1.05
SPDYE4A6NLX3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SPDYE4A6NLX3 REXO1L12P-201ENST00000622156 912 ntBASIC21.63■■□□□ 1.05
SPDYE4A6NLX3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPDYE4A6NLX3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SPDYE4A6NLX3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SPDYE4A6NLX3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
SPDYE4A6NLX3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPDYE4A6NLX3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC21.63■■□□□ 1.05
SPDYE4A6NLX3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SPDYE4A6NLX3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SPDYE4A6NLX3 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SPDYE4A6NLX3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.62■■□□□ 1.05
SPDYE4A6NLX3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC21.62■■□□□ 1.05
SPDYE4A6NLX3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
SPDYE4A6NLX3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.62■■□□□ 1.05
SPDYE4A6NLX3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.62■■□□□ 1.05
SPDYE4A6NLX3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SPDYE4A6NLX3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SPDYE4A6NLX3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.62■■□□□ 1.05
SPDYE4A6NLX3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SPDYE4A6NLX3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.62■■□□□ 1.05
SPDYE4A6NLX3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SPDYE4A6NLX3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SPDYE4A6NLX3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SPDYE4A6NLX3 AL390719.1-204ENST00000412397 1219 ntBASIC21.62■■□□□ 1.05
SPDYE4A6NLX3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.62■■□□□ 1.05
SPDYE4A6NLX3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SPDYE4A6NLX3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.62■■□□□ 1.05
SPDYE4A6NLX3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SPDYE4A6NLX3 AL023875.1-201ENST00000640777 796 ntBASIC21.62■■□□□ 1.05
SPDYE4A6NLX3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SPDYE4A6NLX3 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
SPDYE4A6NLX3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SPDYE4A6NLX3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.62■■□□□ 1.05
SPDYE4A6NLX3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SPDYE4A6NLX3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC21.62■■□□□ 1.05
SPDYE4A6NLX3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.62■■□□□ 1.05
SPDYE4A6NLX3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SPDYE4A6NLX3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.62■■□□□ 1.05
SPDYE4A6NLX3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SPDYE4A6NLX3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SPDYE4A6NLX3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SPDYE4A6NLX3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SPDYE4A6NLX3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SPDYE4A6NLX3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SPDYE4A6NLX3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SPDYE4A6NLX3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SPDYE4A6NLX3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SPDYE4A6NLX3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SPDYE4A6NLX3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SPDYE4A6NLX3 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SPDYE4A6NLX3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SPDYE4A6NLX3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.61■■□□□ 1.05
SPDYE4A6NLX3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SPDYE4A6NLX3 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.61■■□□□ 1.05
SPDYE4A6NLX3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.61■■□□□ 1.05
SPDYE4A6NLX3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SPDYE4A6NLX3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
SPDYE4A6NLX3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SPDYE4A6NLX3 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SPDYE4A6NLX3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SPDYE4A6NLX3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms