Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 OR6C5P-201ENST00000452388 923 ntBASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 TPT1P7-201ENST00000458300 517 ntBASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 RPL7P48-201ENST00000461513 746 ntBASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 SETP14-201ENST00000497538 873 ntBASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 AC008549.1-201ENST00000512900 643 ntBASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 HMGB1P19-201ENST00000517578 577 ntBASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 POLR2KP1-201ENST00000553226 168 ntBASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 HMGB3P26-201ENST00000560051 582 ntBASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 NPM1P47-201ENST00000560843 856 ntBASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 AL133338.2-201ENST00000604292 736 ntBASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 AC106028.5-201ENST00000610332 395 ntBASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 BX005214.3-202ENST00000619809 325 ntBASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 AL008636.1-201ENST00000625038 1018 ntBASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 AC025048.6-202ENST00000627667 438 ntBASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 MFSD8-242ENST00000641690 4199 ntBASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CTDP1Q9Y5B0 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 AL592182.3-201ENST00000642132 3304 ntBASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 RNA5SP397-201ENST00000391323 118 ntBASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 RN7SKP16-201ENST00000410180 299 ntBASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 RNU2-42P-201ENST00000410697 113 ntBASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 RN7SKP33-201ENST00000410942 340 ntBASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 OR8G2P-201ENST00000412796 908 ntBASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 RPL23AP39-201ENST00000415533 405 ntBASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 RPL31P54-201ENST00000429803 370 ntBASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 MTND4P25-201ENST00000441039 533 ntBASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 AL162388.1-201ENST00000450912 352 ntBASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 BX248409.1-201ENST00000455497 255 ntBASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 AC108475.1-201ENST00000507880 950 ntBASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 AC093840.1-201ENST00000511599 336 ntBASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 FABP5P5-201ENST00000515537 406 ntBASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 AC068135.2-201ENST00000569293 1028 ntBASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 RPL12P25-202ENST00000598100 674 ntBASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 AP003973.1-201ENST00000604639 691 ntBASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 AC090525.3-201ENST00000605601 189 ntBASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 AP005019.3-201ENST00000620418 560 ntBASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 AL356266.1-201ENST00000623311 483 ntBASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 AC095031.1-201ENST00000623685 672 ntBASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 U3.53-201ENST00000628922 216 ntBASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 AC244258.1-201ENST00000637553 1071 ntBASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 AC099654.13-201ENST00000639774 207 ntBASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 AL592148.3-201ENST00000608771 2646 ntBASIC5.44□□□□□ -1.54
CTDP1Q9Y5B0 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CTDP1Q9Y5B0 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.43□□□□□ -1.54
CTDP1Q9Y5B0 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CTDP1Q9Y5B0 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.43□□□□□ -1.54
CTDP1Q9Y5B0 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CTDP1Q9Y5B0 RNU4-91P-201ENST00000364778 135 ntBASIC5.43□□□□□ -1.54
CTDP1Q9Y5B0 RNU6-1283P-201ENST00000365314 105 ntBASIC5.43□□□□□ -1.54
CTDP1Q9Y5B0 MIR1303-201ENST00000408625 86 ntBASIC5.43□□□□□ -1.54
CTDP1Q9Y5B0 RNU2-66P-201ENST00000410650 161 ntBASIC5.43□□□□□ -1.54
CTDP1Q9Y5B0 PIGPP2-201ENST00000411569 458 ntBASIC5.43□□□□□ -1.54
CTDP1Q9Y5B0 AC114814.2-201ENST00000419195 485 ntBASIC5.43□□□□□ -1.54
CTDP1Q9Y5B0 RPS27AP7-201ENST00000422792 455 ntBASIC5.43□□□□□ -1.54
CTDP1Q9Y5B0 AC104651.1-201ENST00000427559 735 ntBASIC5.43□□□□□ -1.54
CTDP1Q9Y5B0 RPL23AP1-201ENST00000428990 471 ntBASIC5.43□□□□□ -1.54
CTDP1Q9Y5B0 AC091390.1-201ENST00000433904 331 ntBASIC5.43□□□□□ -1.54
CTDP1Q9Y5B0 RPL35AP21-201ENST00000437667 333 ntBASIC5.43□□□□□ -1.54
CTDP1Q9Y5B0 AC241584.1-201ENST00000438469 1241 ntBASIC5.43□□□□□ -1.54
CTDP1Q9Y5B0 PPIAP17-201ENST00000438507 471 ntBASIC5.43□□□□□ -1.54
CTDP1Q9Y5B0 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CTDP1Q9Y5B0 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CTDP1Q9Y5B0 COX6CP18-201ENST00000448769 222 ntBASIC5.43□□□□□ -1.54
CTDP1Q9Y5B0 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.43□□□□□ -1.54
CTDP1Q9Y5B0 AC104306.1-201ENST00000449702 371 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms