Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 RNA5SP39-201ENST00000411245 120 ntBASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 CRYBB2P1-203ENST00000415709 538 ntBASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 AC010881.1-201ENST00000433830 235 ntBASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 Z77249.1-201ENST00000444622 1175 ntBASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 RPL29P29-201ENST00000448725 423 ntBASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 HMGB3P30-201ENST00000457863 606 ntBASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 U8.18-201ENST00000459285 133 ntBASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 AC008379.1-201ENST00000463655 464 ntBASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 RPL7P49-201ENST00000471402 708 ntBASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 HMGN1P11-201ENST00000508668 303 ntBASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 RNU6-416P-201ENST00000516265 103 ntBASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 RNU1-95P-201ENST00000516357 160 ntBASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 RNU1-128P-201ENST00000516704 160 ntBASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 RNU4-60P-201ENST00000517239 135 ntBASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 OR4A12P-201ENST00000530847 918 ntBASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 AC004217.3-201ENST00000551552 878 ntBASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 AC087499.8-201ENST00000578406 226 ntBASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 AC015911.5-201ENST00000587076 451 ntBASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 AF001550.2-201ENST00000636643 217 ntBASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA1Q9UND3 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.53□□□□□ -1.85
NPIPA1Q9UND3 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
NPIPA1Q9UND3 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
NPIPA1Q9UND3 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 AC025263.3-201ENST00000622965 1396 ntBASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 AL627171.1-201ENST00000618845 1308 ntBASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 MTND5P28-201ENST00000438005 1594 ntBASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 SNORD46.1-201ENST00000364139 104 ntBASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 SNORA5A-201ENST00000384111 134 ntBASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 RNU6-1151P-201ENST00000384684 107 ntBASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 AL355379.1-201ENST00000405542 640 ntBASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 SNORA11.1-201ENST00000408133 129 ntBASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 AL139247.1-201ENST00000422768 325 ntBASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 RPS15AP1-201ENST00000457423 391 ntBASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 PRELID3BP4-201ENST00000515476 571 ntBASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 RNU6-488P-201ENST00000515918 99 ntBASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 AC008802.1-201ENST00000519121 791 ntBASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 AC022695.1-201ENST00000522089 237 ntBASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 OR6C73P-201ENST00000546432 358 ntBASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 MTCYBP28-201ENST00000566728 1132 ntBASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 HSPE1P14-201ENST00000605812 302 ntBASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 AL158211.2-201ENST00000607282 395 ntBASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 AC069200.1-201ENST00000609511 323 ntBASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 AP005229.2-201ENST00000609980 697 ntBASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 AL590396.4-201ENST00000636779 956 ntBASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 AC018555.1-201ENST00000567548 1980 ntBASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
NPIPA1Q9UND3 MIR208A-201ENST00000362287 71 ntBASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 SNORA63.1-201ENST00000362493 131 ntBASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 RPL21P17-201ENST00000397467 475 ntBASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 ZNF603P-201ENST00000405613 487 ntBASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 AL009174.1-201ENST00000426577 416 ntBASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 AL591419.1-201ENST00000427423 339 ntBASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 AC091286.1-201ENST00000431233 461 ntBASIC3.51□□□□□ -1.85
NPIPA1Q9UND3 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms