Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AL451064.1-201ENST00000607718 471 ntBASIC4.27□□□□□ -1.73
SIX4Q9UIU6 AC084782.3-201ENST00000612282 578 ntBASIC4.27□□□□□ -1.73
SIX4Q9UIU6 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.27□□□□□ -1.73
SIX4Q9UIU6 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.27□□□□□ -1.73
SIX4Q9UIU6 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
SIX4Q9UIU6 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SIX4Q9UIU6 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SIX4Q9UIU6 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
SIX4Q9UIU6 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SIX4Q9UIU6 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SIX4Q9UIU6 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SIX4Q9UIU6 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.27□□□□□ -1.73
SIX4Q9UIU6 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
SIX4Q9UIU6 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.26□□□□□ -1.73
SIX4Q9UIU6 AL592437.2-201ENST00000421655 2434 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 ZNF962P-201ENST00000443465 3140 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SIX4Q9UIU6 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SIX4Q9UIU6 RNU6-317P-201ENST00000384031 107 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 HSPD1P16-201ENST00000402302 394 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 SNORA3C-201ENST00000408792 125 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 RNU6-628P-201ENST00000410675 107 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.26□□□□□ -1.73
SIX4Q9UIU6 USP9YP26-201ENST00000421008 661 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 AC011233.1-201ENST00000422812 283 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 AC092017.2-201ENST00000427600 362 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 MTCO3P21-201ENST00000430791 643 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.26□□□□□ -1.73
SIX4Q9UIU6 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.26□□□□□ -1.73
SIX4Q9UIU6 CBX1P4-201ENST00000439415 457 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 AC092393.1-201ENST00000439625 742 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.26□□□□□ -1.73
SIX4Q9UIU6 ELOCP10-201ENST00000440624 327 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 HMGB1P16-201ENST00000447155 540 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 AL162388.1-201ENST00000450912 352 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 ANKRD26P4-201ENST00000455755 950 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 RPL7AP28-201ENST00000464513 571 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 GAPDHP39-201ENST00000481866 979 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.26□□□□□ -1.73
SIX4Q9UIU6 AC010460.1-201ENST00000507087 466 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.26□□□□□ -1.73
SIX4Q9UIU6 AC093755.1-201ENST00000512950 1023 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 AC008837.2-201ENST00000513076 418 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 MTCO3P28-201ENST00000513351 515 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 NDUFB4P12-201ENST00000513465 390 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.26□□□□□ -1.73
SIX4Q9UIU6 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.26□□□□□ -1.73
SIX4Q9UIU6 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SIX4Q9UIU6 AP003461.1-201ENST00000528866 78 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.26□□□□□ -1.73
SIX4Q9UIU6 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.26□□□□□ -1.73
SIX4Q9UIU6 AC068714.1-201ENST00000559623 800 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 HMGB3P26-201ENST00000560051 582 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.26□□□□□ -1.73
SIX4Q9UIU6 AC018552.3-201ENST00000567416 561 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 AC120057.2-201ENST00000571520 271 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 HNRNPCP4-201ENST00000571636 900 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.26□□□□□ -1.73
SIX4Q9UIU6 AL606490.9-201ENST00000603331 271 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 Z99497.2-201ENST00000603634 310 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 AC233280.2-201ENST00000603917 1070 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 AC069304.3-201ENST00000603938 1084 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 AL022161.1-201ENST00000604390 213 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 ELOCP34-201ENST00000604436 327 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 AL592436.1-201ENST00000605135 558 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SIX4Q9UIU6 AC124312.6-202ENST00000623624 418 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 AC073530.2-201ENST00000623987 261 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 Z73965.1-201ENST00000623412 2297 ntBASIC4.26□□□□□ -1.73
SIX4Q9UIU6 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SIX4Q9UIU6 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SIX4Q9UIU6 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SIX4Q9UIU6 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SIX4Q9UIU6 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SIX4Q9UIU6 DCAF13P3-201ENST00000561147 1334 ntBASIC4.25□□□□□ -1.73
SIX4Q9UIU6 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.25□□□□□ -1.73
SIX4Q9UIU6 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SIX4Q9UIU6 Y_RNA.126-201ENST00000363382 111 ntBASIC4.25□□□□□ -1.73
SIX4Q9UIU6 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
SIX4Q9UIU6 RNU6-157P-201ENST00000383957 107 ntBASIC4.25□□□□□ -1.73
SIX4Q9UIU6 MIR16-1-201ENST00000385271 89 ntBASIC4.25□□□□□ -1.73
SIX4Q9UIU6 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.25□□□□□ -1.73
SIX4Q9UIU6 AC090960.1-201ENST00000421072 306 ntBASIC4.25□□□□□ -1.73
SIX4Q9UIU6 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.25□□□□□ -1.73
SIX4Q9UIU6 AL365396.1-201ENST00000430854 671 ntBASIC4.25□□□□□ -1.73
SIX4Q9UIU6 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.25□□□□□ -1.73
SIX4Q9UIU6 RPL21P110-201ENST00000433345 446 ntBASIC4.25□□□□□ -1.73
SIX4Q9UIU6 UBE2D3P1-201ENST00000436669 444 ntBASIC4.25□□□□□ -1.73
SIX4Q9UIU6 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.25□□□□□ -1.73
SIX4Q9UIU6 UBE2V1P5-201ENST00000440070 405 ntBASIC4.25□□□□□ -1.73
SIX4Q9UIU6 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.25□□□□□ -1.73
SIX4Q9UIU6 RPS7P5-201ENST00000441482 581 ntBASIC4.25□□□□□ -1.73
SIX4Q9UIU6 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.25□□□□□ -1.73
SIX4Q9UIU6 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.25□□□□□ -1.73
SIX4Q9UIU6 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.25□□□□□ -1.73
SIX4Q9UIU6 AC113430.1-201ENST00000506872 718 ntBASIC4.25□□□□□ -1.73
SIX4Q9UIU6 OR5H4P-201ENST00000510851 923 ntBASIC4.25□□□□□ -1.73
SIX4Q9UIU6 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.25□□□□□ -1.73
SIX4Q9UIU6 AC026402.1-201ENST00000513642 170 ntBASIC4.25□□□□□ -1.73
SIX4Q9UIU6 RNU6-352P-201ENST00000516908 107 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms