Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 AC104837.2-201ENST00000427236 424 ntBASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 AC009238.2-201ENST00000431026 355 ntBASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 RPS3AP54-201ENST00000435535 734 ntBASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 RSU1P2-202ENST00000437884 485 ntBASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 MTND4LP16-201ENST00000440828 295 ntBASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 MTND5P14-201ENST00000441481 1267 ntBASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 AC012512.1-201ENST00000446594 718 ntBASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 RGS5-217ENST00000451759 835 ntTSL 3 BASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 AC099563.1-201ENST00000456086 418 ntBASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 AC009127.1-201ENST00000467090 155 ntBASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 AC092989.1-201ENST00000481235 277 ntBASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 RPS4XP14-201ENST00000493072 781 ntBASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 AC114781.4-201ENST00000513707 639 ntBASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 RNA5SP92-201ENST00000516437 110 ntBASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 IGLV2-28-201ENST00000520681 304 ntBASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 COX6CP8-201ENST00000522620 226 ntBASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 ZNF705CP-201ENST00000530515 889 ntBASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 HAUS8P1-201ENST00000549005 542 ntBASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 AC011447.4-201ENST00000587562 111 ntBASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 AP000907.4-201ENST00000604143 237 ntBASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 AL139286.1-201ENST00000604465 483 ntBASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 AC063943.3-201ENST00000615562 356 ntBASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 AC099494.2-201ENST00000623371 978 ntBASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 AP002907.1-201ENST00000606361 1430 ntBASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 AC011155.1-201ENST00000316512 456 ntBASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 MIR649-201ENST00000384843 97 ntBASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 U3.36-201ENST00000408418 213 ntBASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 RNU2-41P-201ENST00000410991 178 ntBASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 TPMTP2-201ENST00000414372 726 ntBASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 AC138393.2-201ENST00000414742 246 ntBASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 NFU1P2-201ENST00000448700 469 ntBASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 AC239809.1-201ENST00000450470 217 ntBASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 AP000893.1-201ENST00000474462 794 ntBASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 RN7SL799P-201ENST00000475891 298 ntBASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 TMEM251P1-201ENST00000503717 318 ntBASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 AC097173.1-201ENST00000505862 819 ntBASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 AC104986.1-201ENST00000517978 436 ntBASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 CYCSP28-201ENST00000534284 321 ntBASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 OR7E18P-201ENST00000592589 702 ntBASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.34□□□□□ -1.55
PPARGC1AQ9UBK2 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms