Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 EXTL2P1-201ENST00000446218 416 ntBASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 AL096803.2-201ENST00000450032 677 ntBASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 AC008280.2-201ENST00000455473 307 ntBASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 GTF2IP12-201ENST00000456547 356 ntBASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 AC126121.1-201ENST00000482313 553 ntBASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 AC068305.1-201ENST00000497406 726 ntBASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 DUXAP2-201ENST00000519198 589 ntBASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 OR8I1P-201ENST00000529291 931 ntBASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 AP000619.3-201ENST00000535634 1127 ntBASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 SERPINE4P-201ENST00000554978 281 ntBASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 AC141257.3-201ENST00000572906 215 ntBASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 BNIP3P22-201ENST00000593399 556 ntBASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 MTATP6P2-201ENST00000603319 678 ntBASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 AC015967.1-201ENST00000619893 476 ntBASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 MTND4P10-201ENST00000446199 1363 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AC007823.1-201ENST00000569932 1566 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 MAPK10-373ENST00000641983 6772 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 SNORA63.1-201ENST00000362493 131 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 DNAJC19P6-201ENST00000401853 280 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 PRRC2CP1-201ENST00000404428 159 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 HMGB3P20-201ENST00000417997 600 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AC245054.1-201ENST00000420944 258 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AC006994.1-201ENST00000438212 839 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 CYCSP43-201ENST00000438233 310 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AL645931.1-201ENST00000439737 410 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AL158053.1-201ENST00000441503 453 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 HSFY3P-201ENST00000444242 1191 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 BX248409.1-201ENST00000455497 255 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AC099563.1-201ENST00000456086 418 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AC069499.1-201ENST00000489433 509 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AC090071.1-201ENST00000507713 644 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AC008885.2-201ENST00000509506 930 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 RN7SKP209-201ENST00000516888 304 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AL121766.1-201ENST00000547436 487 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AGGF1P8-201ENST00000562979 1000 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 MIR3922-201ENST00000585192 84 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 VN1R88P-201ENST00000596787 292 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AC010680.4-201ENST00000605334 543 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AC092354.2-201ENST00000607786 514 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AP005229.2-201ENST00000609980 697 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AC019176.2-201ENST00000611579 315 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AC012314.7-201ENST00000619693 93 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AC244100.1-202ENST00000621554 382 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AC243312.2-201ENST00000623340 601 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AC004777.1-201ENST00000624317 287 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AC091905.1-201ENST00000624400 311 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 AC073055.1-201ENST00000456901 1621 ntBASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.25□□□□□ -1.89
CLCF1Q9UBD9 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLCF1Q9UBD9 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms