Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3□□□□□ -1.93
CCDC88CQ9P219 RNU1-103P-201ENST00000516502 125 ntBASIC3□□□□□ -1.93
CCDC88CQ9P219 AC090136.1-201ENST00000520009 240 ntBASIC3□□□□□ -1.93
CCDC88CQ9P219 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3□□□□□ -1.93
CCDC88CQ9P219 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3□□□□□ -1.93
CCDC88CQ9P219 AC006518.1-201ENST00000541449 943 ntBASIC3□□□□□ -1.93
CCDC88CQ9P219 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3□□□□□ -1.93
CCDC88CQ9P219 AC023813.4-201ENST00000607580 580 ntBASIC3□□□□□ -1.93
CCDC88CQ9P219 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3□□□□□ -1.93
CCDC88CQ9P219 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CCDC88CQ9P219 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
CCDC88CQ9P219 AL355596.1-201ENST00000565399 3996 ntBASIC3□□□□□ -1.93
CCDC88CQ9P219 EI24P2-201ENST00000397776 1076 ntBASIC3□□□□□ -1.93
CCDC88CQ9P219 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3□□□□□ -1.93
CCDC88CQ9P219 AJ239321.1-201ENST00000424255 564 ntBASIC3□□□□□ -1.93
CCDC88CQ9P219 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3□□□□□ -1.93
CCDC88CQ9P219 AC107934.2-201ENST00000518653 310 ntBASIC3□□□□□ -1.93
CCDC88CQ9P219 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCDC88CQ9P219 AC015871.2-201ENST00000603605 948 ntBASIC3□□□□□ -1.93
CCDC88CQ9P219 AL713922.2-201ENST00000619384 716 ntBASIC3□□□□□ -1.93
CCDC88CQ9P219 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3□□□□□ -1.93
CCDC88CQ9P219 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCDC88CQ9P219 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC88CQ9P219 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC88CQ9P219 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.99□□□□□ -1.93
CCDC88CQ9P219 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
CCDC88CQ9P219 MTCO1P14-201ENST00000441695 1559 ntBASIC2.99□□□□□ -1.93
CCDC88CQ9P219 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC2.99□□□□□ -1.93
CCDC88CQ9P219 U3.6-201ENST00000363622 211 ntBASIC2.99□□□□□ -1.93
CCDC88CQ9P219 RNU6-167P-201ENST00000384292 106 ntBASIC2.99□□□□□ -1.93
CCDC88CQ9P219 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.99□□□□□ -1.93
CCDC88CQ9P219 RPL37P3-201ENST00000456825 293 ntBASIC2.99□□□□□ -1.93
CCDC88CQ9P219 UBE2DNL-203ENST00000474922 222 ntBASIC2.99□□□□□ -1.93
CCDC88CQ9P219 RN7SKP43-201ENST00000516173 320 ntBASIC2.99□□□□□ -1.93
CCDC88CQ9P219 PSMA2P1-201ENST00000526365 646 ntBASIC2.99□□□□□ -1.93
CCDC88CQ9P219 AC068446.3-201ENST00000555285 382 ntBASIC2.99□□□□□ -1.93
CCDC88CQ9P219 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.99□□□□□ -1.93
CCDC88CQ9P219 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC88CQ9P219 AL845331.3-202ENST00000562856 261 ntBASIC2.99□□□□□ -1.93
CCDC88CQ9P219 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC88CQ9P219 AC006254.3-201ENST00000603353 884 ntBASIC2.99□□□□□ -1.93
CCDC88CQ9P219 AC103710.3-201ENST00000608157 948 ntBASIC2.99□□□□□ -1.93
CCDC88CQ9P219 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.99□□□□□ -1.93
CCDC88CQ9P219 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC2.98□□□□□ -1.93
CCDC88CQ9P219 SNORA71.1-201ENST00000364523 117 ntBASIC2.98□□□□□ -1.93
CCDC88CQ9P219 MIR634-201ENST00000385208 97 ntBASIC2.98□□□□□ -1.93
CCDC88CQ9P219 RNU6-328P-201ENST00000390887 106 ntBASIC2.98□□□□□ -1.93
CCDC88CQ9P219 BX890604.2-201ENST00000427883 474 ntBASIC2.98□□□□□ -1.93
CCDC88CQ9P219 AC022022.1-201ENST00000430304 178 ntBASIC2.98□□□□□ -1.93
CCDC88CQ9P219 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC88CQ9P219 AP000893.1-201ENST00000474462 794 ntBASIC2.98□□□□□ -1.93
CCDC88CQ9P219 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC88CQ9P219 MIR2276-201ENST00000516886 89 ntBASIC2.98□□□□□ -1.93
CCDC88CQ9P219 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC2.98□□□□□ -1.93
CCDC88CQ9P219 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.98□□□□□ -1.93
CCDC88CQ9P219 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC88CQ9P219 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC88CQ9P219 AC006539.2-201ENST00000601729 572 ntBASIC2.98□□□□□ -1.93
CCDC88CQ9P219 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC88CQ9P219 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC88CQ9P219 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.98□□□□□ -1.93
CCDC88CQ9P219 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC88CQ9P219 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC88CQ9P219 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC88CQ9P219 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC88CQ9P219 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC88CQ9P219 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC88CQ9P219 AC090229.1-201ENST00000590983 1609 ntBASIC2.98□□□□□ -1.93
CCDC88CQ9P219 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.98□□□□□ -1.93
CCDC88CQ9P219 RAD1P1-201ENST00000231383 813 ntBASIC2.98□□□□□ -1.93
CCDC88CQ9P219 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CCDC88CQ9P219 RPL7P53-201ENST00000421245 739 ntBASIC2.98□□□□□ -1.93
CCDC88CQ9P219 AL353678.1-201ENST00000422735 741 ntBASIC2.98□□□□□ -1.93
CCDC88CQ9P219 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.98□□□□□ -1.93
CCDC88CQ9P219 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC88CQ9P219 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC88CQ9P219 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.98□□□□□ -1.93
CCDC88CQ9P219 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
CCDC88CQ9P219 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC88CQ9P219 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC88CQ9P219 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.98□□□□□ -1.93
CCDC88CQ9P219 MIR3186-201ENST00000577404 85 ntBASIC2.98□□□□□ -1.93
CCDC88CQ9P219 AC009452.1-201ENST00000640823 606 ntBASIC2.98□□□□□ -1.93
CCDC88CQ9P219 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC88CQ9P219 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.98□□□□□ -1.93
CCDC88CQ9P219 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC88CQ9P219 RIOK3P1-201ENST00000418778 1528 ntBASIC2.97□□□□□ -1.93
CCDC88CQ9P219 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
CCDC88CQ9P219 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC88CQ9P219 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CCDC88CQ9P219 U3.42-201ENST00000408746 214 ntBASIC2.97□□□□□ -1.93
CCDC88CQ9P219 AL592148.1-201ENST00000413568 445 ntBASIC2.97□□□□□ -1.93
CCDC88CQ9P219 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC88CQ9P219 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC88CQ9P219 HMGN2P7-201ENST00000456186 273 ntBASIC2.97□□□□□ -1.93
CCDC88CQ9P219 RPL23AP14-201ENST00000468281 468 ntBASIC2.97□□□□□ -1.93
CCDC88CQ9P219 RNU6-1231P-201ENST00000517185 103 ntBASIC2.97□□□□□ -1.93
CCDC88CQ9P219 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC88CQ9P219 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC88CQ9P219 AL121603.1-201ENST00000553815 142 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms